Gene Phep_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1838 
Symbol 
ID8252941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2128158 
End bp2128547 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content40% 
IMG OID644935488 
Productglobin 
Protein accessionYP_003092108 
Protein GI255531736 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.342813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000178358 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACAG AACTCGCTAA TTTTGAAGAT ATTGTACTGT TTGTAAACAG TTTTTATGAT 
AAGGTTCAGT CGGACGAACT GATCGGGCCA ATATTTAGTG CAGTAATTAC CGACTGGCAG
CCACATCTGG AGAAGATGTA TAATTTCTGG AATGCAGCTC TTTTTGGTGT GCCCGGTTTT
AAAGGCAATC CCTTTGCCAA ACATGCCCCG CTATCACTGG AGAAGCAACA TTTTGAACGC
TGGCTGCTGC TGTTCAGGCA AACTATAGAT ACTTATTTTG AAGGCACTAT GGCGGAAGAA
ACAAAAAAGA AAGCTGATAT GATGGCGATT ATGTTTTTAA GTAAGATTGA AAATATGAAG
GGTGGCGCAG ATAAAGTTAT ACTGGTCTGA
 
Protein sequence
MKTELANFED IVLFVNSFYD KVQSDELIGP IFSAVITDWQ PHLEKMYNFW NAALFGVPGF 
KGNPFAKHAP LSLEKQHFER WLLLFRQTID TYFEGTMAEE TKKKADMMAI MFLSKIENMK
GGADKVILV