| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1836 |
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| Symbol | |
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| ID | 8252939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2127156 |
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| End bp | 2127533 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644935486 |
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| Product | Transcription elongation factor |
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| Protein accession | YP_003092106 |
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| Protein GI | 255531734 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.513767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000202056 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTACAT CAATTATATT ATCAACGGGA ATTTTTGACT TGTTAAAAGA TCACATCAGA
AGAAGAAAAC TAAGTAAATA TAACCAGGAA AAACTGGAAC AGGAACTTCG TAATGCCAGG
CAGATCCTGA GTAAGGATAT TCCTGCCGAC GTGGTAACAG TGAATACCCG TGTACGTGTT
AAAGAACTGG AAACAGGTGC AGAGTTTAAT TATACACTTG TTCCGCCTGC AAAGGCCAGA
AATAAACACA ATACCCTTTC TATTTTATCG CCCATTGGCG TAGCTATGGT GGGTTATAGT
CAGGGTTCTG AATTAAAATG GGAAATGCCA GAAGGCATTA AAGCTTACAG GATAGAAGAG
GTTACCAGGT TAGCATAA
|
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| Protein sequence | MTTSIILSTG IFDLLKDHIR RRKLSKYNQE KLEQELRNAR QILSKDIPAD VVTVNTRVRV
KELETGAEFN YTLVPPAKAR NKHNTLSILS PIGVAMVGYS QGSELKWEMP EGIKAYRIEE
VTRLA
|
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