Gene Phep_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1824 
Symbol 
ID8252927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2119522 
End bp2120157 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content42% 
IMG OID644935474 
Producthypothetical protein 
Protein accessionYP_003092094 
Protein GI255531722 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000348274 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000080896 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTAAACA ACAAAATCGC TTTTGCAAGG CTGATGGCCT TGCTGAAAAG CATAGACCCG 
GATATACCGC TGCCTGCGGG GCTGGAAGAC TATCTATGGG AAAACATGAT AGTAGAGGCA
ATTTGTAACA AAGCCTGCCG GATTGAAGAA GAAAACAAAA TACCCAAAAA AGCTTATTAT
GTAGTGCGTG GCTTTGTGCT GGTATATGGC TACAACCATG AACAGGACAG GTACCTGTTT
CGCATTTACC GCGAAAACAG CATTGTGGCA ATGGACTGCT TTATGCGGCA GCAAGTATCG
CCTTATTGCA TCTGGCTTTG TAAGGATACC CTGCTCTGGA GCATCAGCAG TGCCTGCATG
GATGCTGTTT ATAAGCATTG GGATGGTATG AAAGCATTTG CCTTTAAAAC TTCATCTAAA
CACAATGCGG CCAAGGAGCA GTCGCGTGCT TCATTATTAG GGATAGAAGA TATAGAAACG
CGGATCCTTG AATTTTATAA AAGGTATAAA GGCTTGCTGC CACCAAAGAA AAGCCCGATA
AGGGATACCT GTATTGCCTG TTTTTTGAGC ATGACTATAA ATGTGCTCAG AAAAAACAGA
CGCAAACTAA AAAATAAAAG TTTGTTAAAA TACTAG
 
Protein sequence
MLNNKIAFAR LMALLKSIDP DIPLPAGLED YLWENMIVEA ICNKACRIEE ENKIPKKAYY 
VVRGFVLVYG YNHEQDRYLF RIYRENSIVA MDCFMRQQVS PYCIWLCKDT LLWSISSACM
DAVYKHWDGM KAFAFKTSSK HNAAKEQSRA SLLGIEDIET RILEFYKRYK GLLPPKKSPI
RDTCIACFLS MTINVLRKNR RKLKNKSLLK Y