Gene Phep_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1823 
Symbol 
ID8252926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2118675 
End bp2119442 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID644935473 
Producthypothetical protein 
Protein accessionYP_003092093 
Protein GI255531721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0181821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000816983 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTAACAA AAAAGAAAAA GAACAAAATT AGGGATCCGG AACGAACGGA AAGGGAGGCC 
CTGGAGGCGA CCGGACAGAT TGTGCGTGAA GATGGCTTTG TGGCCATTAC CGCTACACGG
GTAGCCAGAA TGATAGGTAT GGACCCGGGG ATGATAAACA AACGCTTTGG CAGTTTGAAT
GGCCTGAAGG CCAGGTATAT TGAACTAAGG GATTACCGGA AACGGAACTT TGAAAAATTT
ATGCTGCCCG AAATGGCCAG TTCCGGTGAC GTAAAGCTGA TGTTTATTGA AATGATGCAA
AGCAATTTTG ACCAGTTTGC TGCCGACCTG GAGGTGCAGG GGATTGTTTT TGAGCAGGTA
AGGGTATGGG ATCCGCTGAT GCACAGCCTG TCGGTACAGC TGGAAAAGGA TATGGAACCC
TTGCTGGTCC TGAGCGATCC TTATTTTGAG GGTACAGGTG TGGATTTCAG GTCGGGGATC
TGTTCTATGC TGGGTGGGAT CTATTATCCG GTATGGCATG CCCGGCGCAA CAGGAGCAGC
ATTGCCGGCA GGGACCTTAA CAACCCGCGC GACTACCAGG TATTCAGGGA TACGATTGCC
CGGCAAATAG AGTTTTTTTG GGAGGAAGCA GCGCTGAAAA GGAAGAACCA GATTTGGGCA
AGATTAACCA ACATGCTCCT TTTTGCAGGT GCCTTTTTGA CAGAAAAGGT ACGGGATGGC
TTGAATTGGG TTATGGACTT GTGTTATGAT AAAAAGAGAG AAATATAG
 
Protein sequence
MVTKKKKNKI RDPERTEREA LEATGQIVRE DGFVAITATR VARMIGMDPG MINKRFGSLN 
GLKARYIELR DYRKRNFEKF MLPEMASSGD VKLMFIEMMQ SNFDQFAADL EVQGIVFEQV
RVWDPLMHSL SVQLEKDMEP LLVLSDPYFE GTGVDFRSGI CSMLGGIYYP VWHARRNRSS
IAGRDLNNPR DYQVFRDTIA RQIEFFWEEA ALKRKNQIWA RLTNMLLFAG AFLTEKVRDG
LNWVMDLCYD KKREI