Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1793 |
Symbol | |
ID | 8252896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2085772 |
End bp | 2087511 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644935444 |
Product | hypothetical protein |
Protein accession | YP_003092064 |
Protein GI | 255531692 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0647755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00106985 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAACT TAGAAAGTAT TGCAAAAGAA CTAAAGGCGG AGATTGGCCA ATATGATCCA GATTTATTTG CCAGCCGAAT TGTATCGATC ATTCATGGAT TGACACATCC CTGGAATCAG TCAGTTATTA AAGAGTTAGT TTCTCCTTTA CGGCAGTTAC TTTATCTGCT CAATTTAAAT TTGACATCTC CAGTTATAAA AGAATACAAA GAAGTTTTTT TTGAAGGTTC AGACTGGGTT CATTTGGTAG AATTACTAAA GAAAATGGAA ATTATTCATC AGAATGAATA CGGCGAGTTG AAGCCATTTG CAGATGACTT GTTTAATGAT CTAAGTGAGG ATGAAGTTTT GCGGCGAAGA CTGATAGGTG TATCAACGTA TAACGCTTTC TTTCATCAAG GGCCCCTTCA TTTTGAAGAG CAATTAATTG AGAAAATATC AGAGATATTT AAAAACTTCA ACTCTGAACT GAAGGTAAAT TTTGGATGGG ATGCCGTAGA TTTCCTGTCT TTATATGACT GTCTGGATAA TTTGCGTCAA GAAAAGGAAG ACAATGCTTT TATGAAAAAA CCTCAAAGAA AGGAACCGAG TGTAGAGGAG TTCAAACAAA ATGTCTCCGA TGCCTTGAAA AATGGCAAAT CCTTTCAAGA GGCTATGATG GAAGCCGCGC CTTTTGACAC TTCAATTTTT GAATATCAAA GTAATCCATC CAGTGTTAAT ATATTTTATA AAGGGGATTT GAAAGATTTT TCAGAAGTTC TGTCAGAAGC TTTACTTGCG AATTTTACAG TCAGGAGAAC AGAAATGGAA TCATTCCAAT TTTTTAGCCA GCCAAACCAA ATTCTCAAAA AACCCATTTA CGAATTAAAT AATGGCGGCT ATTTAATAGT AGATTATAGG CTTTTACTTA GTGCCATATT TTCGTTCTTA CAGCAGAAAT GTTCGGAAAT AATTAAAAAA CCCAATAGAT TAACAAGCGC AAAAGATAAA TACTTGGAGA AGAAGGTGAC CGAAGTGTTT ACTGATTTTT ATAAAAAAGA TCAAAAAGCT ATGATATTTT CGTCATACTA TCTGGACGGC AACGAACGTG ATCTCCTAGT TTTATCAAAA GATACTGCCT TGATTATTGA GGCCAAAGCT GGAAACGTTC GGGAACCAAT GTTTGATCCA GATAAAGCCT ACGATAAAAT ATGGTCTGAT TTTAAGGAAA CAATCGACTA CGGCTATGAA CAGGCGTTTT CCGTGAAGGA AAAATTCCTG GAAAAACAAG TCTTTGATAT TACCGATGAA AAAAAGAAGG TTTTACATTC GATTGATCCG GGTATATATA TAAATATTTT TTCAATAATA ATAACATATA ATAAGTTTGG GCATGCTCAA AACGACTTAT GGCTTATGTT AGATTTATTT GATGAAGATG AGGAATATCC TTGGTCCGTG TGTGTTGATG ACTTAGATAT TTTTCTTTTG GCAATGAAAA AAATGAATTT CTCTTTAATT GATTTTAATC GATTTTTGAA ACTCAGGTCA CAGCTACATG GCAATCTTGT TGTAAATGAT GAAGGCCGTG TAATGGGACA TTTTTTAACA AATAAAAGGT TTCAACTGAA TAAGGGTACT TATAGATTTC CTGCAAGCGA CGACATAATT TTTGATAAAC TTTACAGCAC GGGCCTCGGT TTCAAAAACG AAAGACGATT AACAATGAAG CAGGACCCTC GTATTAGAAA ATTATATTAA
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Protein sequence | MENLESIAKE LKAEIGQYDP DLFASRIVSI IHGLTHPWNQ SVIKELVSPL RQLLYLLNLN LTSPVIKEYK EVFFEGSDWV HLVELLKKME IIHQNEYGEL KPFADDLFND LSEDEVLRRR LIGVSTYNAF FHQGPLHFEE QLIEKISEIF KNFNSELKVN FGWDAVDFLS LYDCLDNLRQ EKEDNAFMKK PQRKEPSVEE FKQNVSDALK NGKSFQEAMM EAAPFDTSIF EYQSNPSSVN IFYKGDLKDF SEVLSEALLA NFTVRRTEME SFQFFSQPNQ ILKKPIYELN NGGYLIVDYR LLLSAIFSFL QQKCSEIIKK PNRLTSAKDK YLEKKVTEVF TDFYKKDQKA MIFSSYYLDG NERDLLVLSK DTALIIEAKA GNVREPMFDP DKAYDKIWSD FKETIDYGYE QAFSVKEKFL EKQVFDITDE KKKVLHSIDP GIYINIFSII ITYNKFGHAQ NDLWLMLDLF DEDEEYPWSV CVDDLDIFLL AMKKMNFSLI DFNRFLKLRS QLHGNLVVND EGRVMGHFLT NKRFQLNKGT YRFPASDDII FDKLYSTGLG FKNERRLTMK QDPRIRKLY
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