Gene Phep_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1793 
Symbol 
ID8252896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2085772 
End bp2087511 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content34% 
IMG OID644935444 
Producthypothetical protein 
Protein accessionYP_003092064 
Protein GI255531692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0647755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00106985 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAACT TAGAAAGTAT TGCAAAAGAA CTAAAGGCGG AGATTGGCCA ATATGATCCA 
GATTTATTTG CCAGCCGAAT TGTATCGATC ATTCATGGAT TGACACATCC CTGGAATCAG
TCAGTTATTA AAGAGTTAGT TTCTCCTTTA CGGCAGTTAC TTTATCTGCT CAATTTAAAT
TTGACATCTC CAGTTATAAA AGAATACAAA GAAGTTTTTT TTGAAGGTTC AGACTGGGTT
CATTTGGTAG AATTACTAAA GAAAATGGAA ATTATTCATC AGAATGAATA CGGCGAGTTG
AAGCCATTTG CAGATGACTT GTTTAATGAT CTAAGTGAGG ATGAAGTTTT GCGGCGAAGA
CTGATAGGTG TATCAACGTA TAACGCTTTC TTTCATCAAG GGCCCCTTCA TTTTGAAGAG
CAATTAATTG AGAAAATATC AGAGATATTT AAAAACTTCA ACTCTGAACT GAAGGTAAAT
TTTGGATGGG ATGCCGTAGA TTTCCTGTCT TTATATGACT GTCTGGATAA TTTGCGTCAA
GAAAAGGAAG ACAATGCTTT TATGAAAAAA CCTCAAAGAA AGGAACCGAG TGTAGAGGAG
TTCAAACAAA ATGTCTCCGA TGCCTTGAAA AATGGCAAAT CCTTTCAAGA GGCTATGATG
GAAGCCGCGC CTTTTGACAC TTCAATTTTT GAATATCAAA GTAATCCATC CAGTGTTAAT
ATATTTTATA AAGGGGATTT GAAAGATTTT TCAGAAGTTC TGTCAGAAGC TTTACTTGCG
AATTTTACAG TCAGGAGAAC AGAAATGGAA TCATTCCAAT TTTTTAGCCA GCCAAACCAA
ATTCTCAAAA AACCCATTTA CGAATTAAAT AATGGCGGCT ATTTAATAGT AGATTATAGG
CTTTTACTTA GTGCCATATT TTCGTTCTTA CAGCAGAAAT GTTCGGAAAT AATTAAAAAA
CCCAATAGAT TAACAAGCGC AAAAGATAAA TACTTGGAGA AGAAGGTGAC CGAAGTGTTT
ACTGATTTTT ATAAAAAAGA TCAAAAAGCT ATGATATTTT CGTCATACTA TCTGGACGGC
AACGAACGTG ATCTCCTAGT TTTATCAAAA GATACTGCCT TGATTATTGA GGCCAAAGCT
GGAAACGTTC GGGAACCAAT GTTTGATCCA GATAAAGCCT ACGATAAAAT ATGGTCTGAT
TTTAAGGAAA CAATCGACTA CGGCTATGAA CAGGCGTTTT CCGTGAAGGA AAAATTCCTG
GAAAAACAAG TCTTTGATAT TACCGATGAA AAAAAGAAGG TTTTACATTC GATTGATCCG
GGTATATATA TAAATATTTT TTCAATAATA ATAACATATA ATAAGTTTGG GCATGCTCAA
AACGACTTAT GGCTTATGTT AGATTTATTT GATGAAGATG AGGAATATCC TTGGTCCGTG
TGTGTTGATG ACTTAGATAT TTTTCTTTTG GCAATGAAAA AAATGAATTT CTCTTTAATT
GATTTTAATC GATTTTTGAA ACTCAGGTCA CAGCTACATG GCAATCTTGT TGTAAATGAT
GAAGGCCGTG TAATGGGACA TTTTTTAACA AATAAAAGGT TTCAACTGAA TAAGGGTACT
TATAGATTTC CTGCAAGCGA CGACATAATT TTTGATAAAC TTTACAGCAC GGGCCTCGGT
TTCAAAAACG AAAGACGATT AACAATGAAG CAGGACCCTC GTATTAGAAA ATTATATTAA
 
Protein sequence
MENLESIAKE LKAEIGQYDP DLFASRIVSI IHGLTHPWNQ SVIKELVSPL RQLLYLLNLN 
LTSPVIKEYK EVFFEGSDWV HLVELLKKME IIHQNEYGEL KPFADDLFND LSEDEVLRRR
LIGVSTYNAF FHQGPLHFEE QLIEKISEIF KNFNSELKVN FGWDAVDFLS LYDCLDNLRQ
EKEDNAFMKK PQRKEPSVEE FKQNVSDALK NGKSFQEAMM EAAPFDTSIF EYQSNPSSVN
IFYKGDLKDF SEVLSEALLA NFTVRRTEME SFQFFSQPNQ ILKKPIYELN NGGYLIVDYR
LLLSAIFSFL QQKCSEIIKK PNRLTSAKDK YLEKKVTEVF TDFYKKDQKA MIFSSYYLDG
NERDLLVLSK DTALIIEAKA GNVREPMFDP DKAYDKIWSD FKETIDYGYE QAFSVKEKFL
EKQVFDITDE KKKVLHSIDP GIYINIFSII ITYNKFGHAQ NDLWLMLDLF DEDEEYPWSV
CVDDLDIFLL AMKKMNFSLI DFNRFLKLRS QLHGNLVVND EGRVMGHFLT NKRFQLNKGT
YRFPASDDII FDKLYSTGLG FKNERRLTMK QDPRIRKLY