| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1789 |
|---|
| Symbol | |
|---|
| ID | 8252892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2082559 |
|---|
| End bp | 2082948 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644935440 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003092060 |
|---|
| Protein GI | 255531688 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5646] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0197071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00126206 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATG AAAAGAAAAA CATTCAAAAC GTTGACGACT ATTTGGCGAC TTTAACTCCA
GATCAACAGC GACATTTAGA AAAAATACGA GAACTGGTTC TATCTGCTTC CCCCGAACTT
GAAGAGGGAC TGAATTATTC TACTCCCGCC TACCGAACAA ATGGCAAATT GGTAGTAGGA
ATTGCCGCCG CCAAAAGACA TACAGGATTT TATGTAATGA GTGAGGCGGT TATGAATCAG
TTCAAAGATA GGCTAATGGA ATATGAACTT GCTAAAACCA GCTTCTCAAT ACCTCTTGAC
AAAGTACCCT CAGCGGAGTT GGTTAAGCAA ATAGTTTTAG CGAGAACAAC TGAGAACAGC
AATGGAAAAT CAAAATCCAC TAGCAAATAA
|
|---|
| Protein sequence | MKNEKKNIQN VDDYLATLTP DQQRHLEKIR ELVLSASPEL EEGLNYSTPA YRTNGKLVVG
IAAAKRHTGF YVMSEAVMNQ FKDRLMEYEL AKTSFSIPLD KVPSAELVKQ IVLARTTENS
NGKSKSTSK
|
|---|
| |