Gene Phep_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1768 
Symbol 
ID8252871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2068404 
End bp2069705 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content42% 
IMG OID644935419 
Producthypothetical protein 
Protein accessionYP_003092039 
Protein GI255531667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00932927 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACCA TAAGCGCAAA GGTTTATGAA CACCACAAGA AAGCAGATGG CACCTACAAT 
GTAAAAATCT GTGTCCATCA CAAAGACCAA AGAAAGTTTA TTGACACCAA TCACTATGTA
GTCAAGAAAC AATTAACGGC AAAACTAAAG ATCAAAGACA ATTTTGTAAA TGATCTGATT
GATGACCAGC TGAAAGGCTA TCGCAAGATT ATCAGCGAAC TTGGTGAAAA GCTCAACTTC
TTTAATGCGG AATCCCTTAG AGATTACCTT CGCGACAAGG ATGCTGACGT GGATTTTATC
AAGTTCTGTC AGCTGCACAT TGAGCAACTG AAAAAGGAAA ATCGTACCGG AACAGCTGGG
ACCCATCGTA CGGTACGTAA CAGTCTGATT GATTATTTCA AACGGGACTC CGTATCTATT
ACAGAGATCA ATTCAAATAT GCTCGTCTCC TATGAAAGAT TTCTAAGAAG CAGGCGTACC
ATGACCCGTA TTGTAACCGA GGATGGCCAG ACAAAAGAGA AAACAATTGA CGGGCTTTCC
GATAGTGGGC TACATAATCA CATGCGTGAT CTGCGTACGC TTTTCAATGC TGCCTGTAAT
ATGTATAATA ACGAAGACCT GGGTATTTAC CGGATCAAGC ATTATCCGTT TAAAAAGTAC
AAAGTTGGCT CCTCCCCACT TACCAGGAAA AGGAACAACA CATTGGATGA AGTCAGGGCG
GTGCGGGACT GCGTTACTAA AGCAGGAAGT CGGGCAGAAT TGGCTAAAGA AATCTATATG
CTGTCGTTCT ATCTATGCGG GATGAACGCG GTAGACTTCT ATCATTTAAC AAAAAATGAT
ATTAGGGCGG GACGAATTGA TTATAACCGG GCTAAAACAC AAGGCCGGAG AAAGGACAAT
GCGTTTATCA GTATTAAGAT TATTGAAGAA GCCAAACCAC TATTAGAAAA GTATATTGAA
AAGCTATCTG TACGTTATTC AACATACGGT GGTTTGGATA CCGCGCTAAG CCAGGGCATG
AAGCAGCTGC GAAAACTCAC GGGCATTCCC GGAGCAACAA TTTATTGGGC AAGGCACACA
TTTGCAACTA TAGCTAGGAA TGCCTGCCGT ATAAGCAAGG ATGATGTTGC ATTAGCCTTG
AACCATGTAG ACGATGAACA CCGCACGACA GACATCTATA TCGAAAAAGA TTGGAGTATT
GTTGATGAAG TACAGATTAA AGTCATCGGT CTATTGAGAA GGTTGGATAT GAAGATTGGC
GCAAAACAAA AGAAAGAAGC ATCGCTAGAG AAAGCTGCAT AA
 
Protein sequence
MATISAKVYE HHKKADGTYN VKICVHHKDQ RKFIDTNHYV VKKQLTAKLK IKDNFVNDLI 
DDQLKGYRKI ISELGEKLNF FNAESLRDYL RDKDADVDFI KFCQLHIEQL KKENRTGTAG
THRTVRNSLI DYFKRDSVSI TEINSNMLVS YERFLRSRRT MTRIVTEDGQ TKEKTIDGLS
DSGLHNHMRD LRTLFNAACN MYNNEDLGIY RIKHYPFKKY KVGSSPLTRK RNNTLDEVRA
VRDCVTKAGS RAELAKEIYM LSFYLCGMNA VDFYHLTKND IRAGRIDYNR AKTQGRRKDN
AFISIKIIEE AKPLLEKYIE KLSVRYSTYG GLDTALSQGM KQLRKLTGIP GATIYWARHT
FATIARNACR ISKDDVALAL NHVDDEHRTT DIYIEKDWSI VDEVQIKVIG LLRRLDMKIG
AKQKKEASLE KAA