Gene Phep_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1766 
Symbol 
ID8252868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2066483 
End bp2067292 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content35% 
IMG OID644935416 
Producthypothetical protein 
Protein accessionYP_003092037 
Protein GI255531665 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00371107 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGAAG AAATCAACCA CCCTGTACAA GGAAGCAAAT ACGACAAGAT TTTTAGGGAA 
AACATGCACA ATACCCTACC TGGTATAATT AAACACGTCC TTCATTTAAA CGTCAATACT
GTAGAAGAAC TTGCCGATGA TGTACAATTT ACCAAAGAAA GAAAAACAGA TTTACTAAAG
AAGGTTAGGG ATAACAAAGG TAACCGATAT GTGCTGCATG TTGAATACCA AACGGATAAT
TATCCGGAAA TGGCTTTTCG TATGGCAGAG TATAGCATCA TGTTGCAAAG AAAACATAAG
TTGCCTGTTA AACAGTTCGT AATTTACATT GGCCCTGCCA AAGCAAATAT GTCCACTTCT
ATCACAACTA AGGATTTTCG ATTCCGCTAC AACTTAACAG AGCTCTCTGC TGTAAACTAT
AAACTGTTCT TAAAATCAGA TTTGGTTGAG GAGAAAATGC TGGCAATTTT AAGTAATTTA
GCATCAGAAA GCACAGAAAG TGTATTGGCA CAGGTTGTTC AGGAAATAGA AACCCATACT
TCTACATTAG AACAAGGGCG TTATTTTAGA CAGCTAAGGA TACTTTTGCA ATTACGTAAT
TTAAATAAAA AAGCAATTAA AGATATGGCA CTGGTAGGAA AAATATTTAA AGAAGAAAAA
GACATTTTAT ATCGTAGAGG AGAAATTAAA GGTCGTTATG AAGAGGCGTT GGAAATTGCT
CTTGAAATGC TAGTTAACAA ATACCCTATA GAAGAAATCA TTAAGCTTAC CAAACTTTCA
AAAGAAGAAA TCCAGTCCCT TCAAAAATAA
 
Protein sequence
MPEEINHPVQ GSKYDKIFRE NMHNTLPGII KHVLHLNVNT VEELADDVQF TKERKTDLLK 
KVRDNKGNRY VLHVEYQTDN YPEMAFRMAE YSIMLQRKHK LPVKQFVIYI GPAKANMSTS
ITTKDFRFRY NLTELSAVNY KLFLKSDLVE EKMLAILSNL ASESTESVLA QVVQEIETHT
STLEQGRYFR QLRILLQLRN LNKKAIKDMA LVGKIFKEEK DILYRRGEIK GRYEEALEIA
LEMLVNKYPI EEIIKLTKLS KEEIQSLQK