Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1744 |
Symbol | |
ID | 8252846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2055112 |
End bp | 2055945 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644935395 |
Product | hypothetical protein |
Protein accession | YP_003092016 |
Protein GI | 255531644 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00312138 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGAAG AAATCAACCA CCCTGTACAA GGAAGCAAAT ACGACAAGAT TTTTAGGGAA AACATGCACA ATATCCTACC TGGTATAATT AAACACGTCC TTCATTTAAA CGTCAATACT GTTGAAGAAC TTGCCGATGA TGTACAATTT ACCAAAGAAA GAAAAACAGA TTTACTAAAG AAGGTTAGGG ATAACAAGGG CAACAGATAT GTGCTGCATG TAGAATACCA AACGGATAAT TATCCGGAAA TGGCATTCCG TATGGCAGAG TATAGCATCA TGTTGCAAAG AAAACATAAG TTGCCTGTTA AACAGTTCGT AATTTACATT GGCTCTGCCA AAGCAAATAT GGCCACTTCT ATCACAACTA AGGATTTCCG ATTCCGCTAC AACTTAACAG AGCTCTCTGC TGTAAACTAT AAACTGTTCT TAAAATCAGA TTTGGTTGAG GAGAAAATGC TGGCAATTTT AAGTAATTTA GCATCAGAAA GCACAGAAAG TGTATTGGCA CAGGTTGTTC AGGAAATAGA AACCCATACT TCTACACTGG AACAAGGGCG TTACTTTAGG CAGCTAAGGA TACTTTTGCA ATTACGTAAT TTAAATAAAA AAGCAATTAA AGATATGGCA CTGGTAGGAA AAATATTTAA AGAAGAAAAA GACATTTTAT ATCGTAGAGG CGAAATTAAA GGCGAGATTA AAGGTATTGA AAAAGGTCGT TATGAAGAAG CATTGGAAAT TGCTCTTGAA ATGCTAGTTA ACAAATACCC AATAGAAGAA ATCATTAAGC TTACCAAACT TTCAAAAGAA GAAATCCAGG CCCTTCAAAA ATAA
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Protein sequence | MPEEINHPVQ GSKYDKIFRE NMHNILPGII KHVLHLNVNT VEELADDVQF TKERKTDLLK KVRDNKGNRY VLHVEYQTDN YPEMAFRMAE YSIMLQRKHK LPVKQFVIYI GSAKANMATS ITTKDFRFRY NLTELSAVNY KLFLKSDLVE EKMLAILSNL ASESTESVLA QVVQEIETHT STLEQGRYFR QLRILLQLRN LNKKAIKDMA LVGKIFKEEK DILYRRGEIK GEIKGIEKGR YEEALEIALE MLVNKYPIEE IIKLTKLSKE EIQALQK
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