Gene Phep_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1744 
Symbol 
ID8252846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2055112 
End bp2055945 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content35% 
IMG OID644935395 
Producthypothetical protein 
Protein accessionYP_003092016 
Protein GI255531644 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00312138 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGAAG AAATCAACCA CCCTGTACAA GGAAGCAAAT ACGACAAGAT TTTTAGGGAA 
AACATGCACA ATATCCTACC TGGTATAATT AAACACGTCC TTCATTTAAA CGTCAATACT
GTTGAAGAAC TTGCCGATGA TGTACAATTT ACCAAAGAAA GAAAAACAGA TTTACTAAAG
AAGGTTAGGG ATAACAAGGG CAACAGATAT GTGCTGCATG TAGAATACCA AACGGATAAT
TATCCGGAAA TGGCATTCCG TATGGCAGAG TATAGCATCA TGTTGCAAAG AAAACATAAG
TTGCCTGTTA AACAGTTCGT AATTTACATT GGCTCTGCCA AAGCAAATAT GGCCACTTCT
ATCACAACTA AGGATTTCCG ATTCCGCTAC AACTTAACAG AGCTCTCTGC TGTAAACTAT
AAACTGTTCT TAAAATCAGA TTTGGTTGAG GAGAAAATGC TGGCAATTTT AAGTAATTTA
GCATCAGAAA GCACAGAAAG TGTATTGGCA CAGGTTGTTC AGGAAATAGA AACCCATACT
TCTACACTGG AACAAGGGCG TTACTTTAGG CAGCTAAGGA TACTTTTGCA ATTACGTAAT
TTAAATAAAA AAGCAATTAA AGATATGGCA CTGGTAGGAA AAATATTTAA AGAAGAAAAA
GACATTTTAT ATCGTAGAGG CGAAATTAAA GGCGAGATTA AAGGTATTGA AAAAGGTCGT
TATGAAGAAG CATTGGAAAT TGCTCTTGAA ATGCTAGTTA ACAAATACCC AATAGAAGAA
ATCATTAAGC TTACCAAACT TTCAAAAGAA GAAATCCAGG CCCTTCAAAA ATAA
 
Protein sequence
MPEEINHPVQ GSKYDKIFRE NMHNILPGII KHVLHLNVNT VEELADDVQF TKERKTDLLK 
KVRDNKGNRY VLHVEYQTDN YPEMAFRMAE YSIMLQRKHK LPVKQFVIYI GSAKANMATS
ITTKDFRFRY NLTELSAVNY KLFLKSDLVE EKMLAILSNL ASESTESVLA QVVQEIETHT
STLEQGRYFR QLRILLQLRN LNKKAIKDMA LVGKIFKEEK DILYRRGEIK GEIKGIEKGR
YEEALEIALE MLVNKYPIEE IIKLTKLSKE EIQALQK