| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1739 |
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| Symbol | |
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| ID | 8252841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2052072 |
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| End bp | 2052848 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935390 |
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| Product | DNA-formamidopyrimidine glycosylase |
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| Protein accession | YP_003092011 |
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| Protein GI | 255531639 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00140329 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGAAT TACCTGATCT TGAAGTCTTC GCTGCTAACC TGGAAAAACG GTTTAAACAT
AAAACCTTGG AGCGCCTGGA AGTGCAGGTA GCTAAAAAGC TGAATGTGCC GGAAAAGGAG
CTAAAAGAAA CCCTGGAGGG GCATCAGCTG ACTGCTGTAA AACGCGAAGG AAAAACCATC
CAATTGCATT TTGGTCCTGA AAGGATATTG GGCTTACACC TGATGCTGCA TGGAGCGTTA
AATCTGATTG AAGCTGATGA GAAAATAAAA TATCCCATTG TCTCATTTCA TTTTAAGACT
GGTCATGGTT TCGCTTTAAC TGATTTTCAA AAGGCTGCGA CCCTGACATT AAATCCTGTG
GTGTCTGATG TACCGGACGC GCTTTCCAAA GAAATGAGCG TGAACTATCT GGAAGCGGTT
TTGGCGAAAA AGAAGGCGCC TATAAAAACG GTATTGATGG ATCAGCACCT TATCCGGGGT
ATCGGTAATA CTTATGCGGA TGAAATTTTA TGGGAGGCAG GAATTTCACC ATTCTCAGTT
TCTAAAGCCA TTCCTAAAGC AAAAGTAAGG GAACTGCACC AGGTGATCGG AAAGTTATTG
CGTAAGGAAA TTCAGCAGAT CAGTAAAATG CTGCCAGATG AGCTGGGTGG AGAGATTAAG
GATTTTCTGA AAATCCACGG CGCAGGTATC AAAGAAAGCC CGACCGGTAA AAAGATACTG
GTAGAAGAGA TTGGTGGGCG TAAATCTTAT TATACAGAGG AGCAGGAATT GTACTAG
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| Protein sequence | MPELPDLEVF AANLEKRFKH KTLERLEVQV AKKLNVPEKE LKETLEGHQL TAVKREGKTI
QLHFGPERIL GLHLMLHGAL NLIEADEKIK YPIVSFHFKT GHGFALTDFQ KAATLTLNPV
VSDVPDALSK EMSVNYLEAV LAKKKAPIKT VLMDQHLIRG IGNTYADEIL WEAGISPFSV
SKAIPKAKVR ELHQVIGKLL RKEIQQISKM LPDELGGEIK DFLKIHGAGI KESPTGKKIL
VEEIGGRKSY YTEEQELY
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