Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1727 |
Symbol | |
ID | 8252829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2044807 |
End bp | 2045361 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644935379 |
Product | protein of unknown function DUF892 |
Protein accession | YP_003092000 |
Protein GI | 255531628 |
COG category | [S] Function unknown |
COG ID | [COG3685] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.403983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000459015 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACTA CAACAAAAAC AGGCGCAAAG ACCGCCACAA AATCAAAAAC AGGGAAAATG GAAAATTCAG AATTCCATGA ATTCTTCGTG GACGAACTGA AAGACATCTA CTGGGCGGAA AAACACCTTT CTAAAGCCCT CCCTAAAATG AAAAAAGCAG CAACCAGTCC GGAACTGGCA GCCGCATTTG AAAAACATAC TGAAGAAACC AATAACCACA TCGCGACCCT CGAACAAGTA TTCCAGTTGC TGGATGAGAA AGCCCAGGCA AAAAAATGCG ATGCCATGGA AGGCCTGTTA AAAGAAGCCG AAAGCATCAT TGAAGATACC GATGCGGATA CCATGATCCG TGACGCCGGG CTTATTCTTG CCGCCCAAAA AGTAGAGCAT TACGAAATCG CAACCTATGG CACACTGGTA GTTTTTGCCC AAAACATGGG ACATACCGAT GTGGCCGAGC TCCTGCAATT TACCCTGGAC AACGAAAAAG CGACGGACGT TGCCCTTACC GAAATTGCAG TCAGCTCAAT CAACGAGCAG GCGGCAGCAG AATAA
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Protein sequence | MATTTKTGAK TATKSKTGKM ENSEFHEFFV DELKDIYWAE KHLSKALPKM KKAATSPELA AAFEKHTEET NNHIATLEQV FQLLDEKAQA KKCDAMEGLL KEAESIIEDT DADTMIRDAG LILAAQKVEH YEIATYGTLV VFAQNMGHTD VAELLQFTLD NEKATDVALT EIAVSSINEQ AAAE
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