Gene Phep_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1727 
Symbol 
ID8252829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2044807 
End bp2045361 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content47% 
IMG OID644935379 
Productprotein of unknown function DUF892 
Protein accessionYP_003092000 
Protein GI255531628 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.403983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000459015 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTA CAACAAAAAC AGGCGCAAAG ACCGCCACAA AATCAAAAAC AGGGAAAATG 
GAAAATTCAG AATTCCATGA ATTCTTCGTG GACGAACTGA AAGACATCTA CTGGGCGGAA
AAACACCTTT CTAAAGCCCT CCCTAAAATG AAAAAAGCAG CAACCAGTCC GGAACTGGCA
GCCGCATTTG AAAAACATAC TGAAGAAACC AATAACCACA TCGCGACCCT CGAACAAGTA
TTCCAGTTGC TGGATGAGAA AGCCCAGGCA AAAAAATGCG ATGCCATGGA AGGCCTGTTA
AAAGAAGCCG AAAGCATCAT TGAAGATACC GATGCGGATA CCATGATCCG TGACGCCGGG
CTTATTCTTG CCGCCCAAAA AGTAGAGCAT TACGAAATCG CAACCTATGG CACACTGGTA
GTTTTTGCCC AAAACATGGG ACATACCGAT GTGGCCGAGC TCCTGCAATT TACCCTGGAC
AACGAAAAAG CGACGGACGT TGCCCTTACC GAAATTGCAG TCAGCTCAAT CAACGAGCAG
GCGGCAGCAG AATAA
 
Protein sequence
MATTTKTGAK TATKSKTGKM ENSEFHEFFV DELKDIYWAE KHLSKALPKM KKAATSPELA 
AAFEKHTEET NNHIATLEQV FQLLDEKAQA KKCDAMEGLL KEAESIIEDT DADTMIRDAG
LILAAQKVEH YEIATYGTLV VFAQNMGHTD VAELLQFTLD NEKATDVALT EIAVSSINEQ
AAAE