Gene Phep_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1717 
Symbol 
ID8252819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2038502 
End bp2038942 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content47% 
IMG OID644935369 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003091990 
Protein GI255531618 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000265045 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000058621 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAAATC ACATCAAACA CAAATGGTTC TTTAATCACC CGCCTGCGGT TGTTTGGCAA 
TACCTGACCG ATTCTGAACT GCTCGCACAA TGGTTGTTGC CTACAGATTT TAAACTGGAG
ATTGGGCATA AATTTGTTTT CGGGGCTAAG CCGATCCGCC GTTTCAGTTT CGATGGCAGG
ATTTACTGCC AGCTCATTGA TTTTGAGCCG GAGAAGATGT TAAAGTATTC CTGGCGGGGA
GGTGCTGGAG AAGATGTCAA ACTGGATTCG ATGGTGACCT GGACGCTGGA GCCCAGGGAT
GGCGGTACTG AACTAACTTT GCTACATGCT GGTTTCAAAG GTCTGAGGAA TTATTTGCCG
TACCTGGTGA TGGGCAAAGG CTGGCTGAAA ATTGCTAAAC GCCTGGCAAA AAGAATGGAG
GAAGAATATG CAACATCCTA A
 
Protein sequence
MENHIKHKWF FNHPPAVVWQ YLTDSELLAQ WLLPTDFKLE IGHKFVFGAK PIRRFSFDGR 
IYCQLIDFEP EKMLKYSWRG GAGEDVKLDS MVTWTLEPRD GGTELTLLHA GFKGLRNYLP
YLVMGKGWLK IAKRLAKRME EEYATS