Gene Phep_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1711 
Symbol 
ID8252813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2032753 
End bp2033451 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content39% 
IMG OID644935363 
Productprotein of unknown function DUF218 
Protein accessionYP_003091984 
Protein GI255531612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.725568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00117492 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTCAA AAGAACTAGT CAGAGAAATT GTAAAAGTAG CAAAAAGTCC GGATATGGAT 
AAAGAATTGA TTGAGGCATT AACCAGTCTA TGCTTTCAGG AAGAAAGCCT GGTTCCATCT
GATGTACTTT TTGTTTTTGG CTCCAACGTT CAGCACCGGG AAATTGCTGA TATCATTAGC
TATATGCTAA ATGCGGAACT GGTAAACCAG GTGGTAATTA CAGGCGGTGT GGCCAATTAT
AATGGTTCCT TTTATAAAAA AGAAGCTGAA TCAGCCCAGA TCAAATCCTA CATTCCGATT
GAAAAATATC CAGATAAACA AATCTATACA GAAAATAAAT CAAAAAACAT CATAGAGAAC
ATCGTTGAGG CACAAAAAGT ATATTCTTTC AAAAATATCC GGAGTATGAC TTTTTTAGCG
CATTCTTATG CCACTACGAG AGCTGCCTTA TCCTTAAAAA GATTTTTCCC CTCAGTAATG
CTGCATTGTA TTCCGCTACC GCTTCCTACC GATTATTTAA AATACCCGAT CAGCAGGCAA
ATGTGGTGGA GGACGGCGTA TGGCCGCGGG CTGGTATGGG GAGAATATTT AAGGTTACAG
ACCTACGGAC AAAGAGGAGA TTTTCCTATA GCCGAAATAG AAGCATCCCT GGCCTATATA
AAGCGCATTG CTGAACAAAA ATCTTTATCA GTAGCCTGA
 
Protein sequence
MESKELVREI VKVAKSPDMD KELIEALTSL CFQEESLVPS DVLFVFGSNV QHREIADIIS 
YMLNAELVNQ VVITGGVANY NGSFYKKEAE SAQIKSYIPI EKYPDKQIYT ENKSKNIIEN
IVEAQKVYSF KNIRSMTFLA HSYATTRAAL SLKRFFPSVM LHCIPLPLPT DYLKYPISRQ
MWWRTAYGRG LVWGEYLRLQ TYGQRGDFPI AEIEASLAYI KRIAEQKSLS VA