Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1711 |
Symbol | |
ID | 8252813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2032753 |
End bp | 2033451 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644935363 |
Product | protein of unknown function DUF218 |
Protein accession | YP_003091984 |
Protein GI | 255531612 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.725568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00117492 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGTCAA AAGAACTAGT CAGAGAAATT GTAAAAGTAG CAAAAAGTCC GGATATGGAT AAAGAATTGA TTGAGGCATT AACCAGTCTA TGCTTTCAGG AAGAAAGCCT GGTTCCATCT GATGTACTTT TTGTTTTTGG CTCCAACGTT CAGCACCGGG AAATTGCTGA TATCATTAGC TATATGCTAA ATGCGGAACT GGTAAACCAG GTGGTAATTA CAGGCGGTGT GGCCAATTAT AATGGTTCCT TTTATAAAAA AGAAGCTGAA TCAGCCCAGA TCAAATCCTA CATTCCGATT GAAAAATATC CAGATAAACA AATCTATACA GAAAATAAAT CAAAAAACAT CATAGAGAAC ATCGTTGAGG CACAAAAAGT ATATTCTTTC AAAAATATCC GGAGTATGAC TTTTTTAGCG CATTCTTATG CCACTACGAG AGCTGCCTTA TCCTTAAAAA GATTTTTCCC CTCAGTAATG CTGCATTGTA TTCCGCTACC GCTTCCTACC GATTATTTAA AATACCCGAT CAGCAGGCAA ATGTGGTGGA GGACGGCGTA TGGCCGCGGG CTGGTATGGG GAGAATATTT AAGGTTACAG ACCTACGGAC AAAGAGGAGA TTTTCCTATA GCCGAAATAG AAGCATCCCT GGCCTATATA AAGCGCATTG CTGAACAAAA ATCTTTATCA GTAGCCTGA
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Protein sequence | MESKELVREI VKVAKSPDMD KELIEALTSL CFQEESLVPS DVLFVFGSNV QHREIADIIS YMLNAELVNQ VVITGGVANY NGSFYKKEAE SAQIKSYIPI EKYPDKQIYT ENKSKNIIEN IVEAQKVYSF KNIRSMTFLA HSYATTRAAL SLKRFFPSVM LHCIPLPLPT DYLKYPISRQ MWWRTAYGRG LVWGEYLRLQ TYGQRGDFPI AEIEASLAYI KRIAEQKSLS VA
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