Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1703 |
Symbol | |
ID | 8252805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2017515 |
End bp | 2018690 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935355 |
Product | Exo-alpha-sialidase |
Protein accession | YP_003091976 |
Protein GI | 255531604 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4409] Neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.137706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0157049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACCT CAATCAAAAA ACCAAAAATG ATTGGCGGAG TGTTTTGTTT TCTGATGCTG ATCTTTTTTT GCAGGGACAT TGCTTCGGCA GCTTCTTTAA CATCTGGAAT TTCTCGTCTG GATAGTTTGA ATTTCATTTA TAAAGCCGGA GAAAATGGCT ATTCCTGTTT TAGAATCCCA GCCCTTATTT ATACAAAAGA TGGGACTCTG CTGGCTTTCG CAGAAGCCAG AAAAAATAAT TGCGGTGATT CGGGTGATAT AGACCTCGTG ATCAAAAGAT CGTCGGACAG GGGCAAAACC TGGAGTAGTT TACAGGTGGT ATGGAGTGAT TCGACCAATA CCTGTGGCAA TCCGGTCCCT GTACAGGATA GGGGTACCAG CCGGATTTGG CTGATATCCA CATGGAACCT GGGGACATTT CATGAAAAAC AGATCATCAG TGATGCCGCA AAAAAAGGAA GACATGTGTA TAAGCTTTAT TCTGATGATG ATGGCAGGAG CTGGTCGGGG CCAACGGAAA TTACGGACCA GGTAAAGAAG CCAGACTGGT CGTGGTATGC TACCGGACCT TGCCATGGGC TGCAAATAAC CAATGGAAAA TATGCCGGGC GATTGGTGAT TCCCATAAAC CACATTGAAA GAGGTACCAA TCAAAATTTT GCGCATATCA TCTACTCAGA TGATCATGGT AAAAGCTGGA ACCTGGGCAA CAATACCCCC CAGGATAAAA TGAATGAAAC TACTGTCGCC GAAATTTCTA AGGGCCGTTT AATGCTGAAT ATGAGAAATG CAGACCGGAG CATTAAAACC AGGCATACTG CTATTAGCAG CAATGGTGGA TTGAGCTGGA ATAATGTTGA AAAGGATACG GTTTTAATAG AACCCATTTG TCAGGGTAGC TTGTTGAGTC ACTTTTACAA TAAAAAGAAA CCCGTTTTGC TGTTTACCAA TCCTGCAAAT GCTAAGCTGC GAGCTAATAT GACGTTAAGG ATGAGCCTGA ATGATGGGAA GACCTGGAAA CACAATTTAG TTTTACATGC TGGCCCATCG GCTTATTCTG ACATCGCGCT TATAGATAAA ACCACAATTG CGAGTTTTTT TGAGGCGGGG TATGAAAAGC CTTATGAAGG TATCGTATTT AAAATCGTCA ATTATTCAGA TCTAATACAA AACTAA
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Protein sequence | MYTSIKKPKM IGGVFCFLML IFFCRDIASA ASLTSGISRL DSLNFIYKAG ENGYSCFRIP ALIYTKDGTL LAFAEARKNN CGDSGDIDLV IKRSSDRGKT WSSLQVVWSD STNTCGNPVP VQDRGTSRIW LISTWNLGTF HEKQIISDAA KKGRHVYKLY SDDDGRSWSG PTEITDQVKK PDWSWYATGP CHGLQITNGK YAGRLVIPIN HIERGTNQNF AHIIYSDDHG KSWNLGNNTP QDKMNETTVA EISKGRLMLN MRNADRSIKT RHTAISSNGG LSWNNVEKDT VLIEPICQGS LLSHFYNKKK PVLLFTNPAN AKLRANMTLR MSLNDGKTWK HNLVLHAGPS AYSDIALIDK TTIASFFEAG YEKPYEGIVF KIVNYSDLIQ N
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