Gene Phep_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1681 
Symbol 
ID8252783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1986943 
End bp1989804 
Gene Length2862 bp 
Protein Length953 aa 
Translation table11 
GC content49% 
IMG OID644935333 
Producthypothetical protein 
Protein accessionYP_003091954 
Protein GI255531582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TTACAATATT CATTTTCTTA ATTGTGCTTT CTGCCTTCCA GAATGCATCA 
GCACAAAGCG GCTTAACCGG TATCAATTAT CAGGGAGTGG CCAGAAACAC AAATGGCACC
GTATTGTCCA ATCAGGCAGT TAAGGTAAAA ATATCCGTAC TCGGCGGCAA TCCGAACGGT
CCCGTTCAGT ACATGGAAGA ACATGCCTTA AACACCAATG CGCTTGGGCT TTTCACCCTA
CAAATTGGTA AAGGTACCGC ACTTACAGGA ACCTTTGCTG CTATACCATG GCAAAATGCC
AACCAATATG CAAAAGTAGA AATGGCAATA ACCGGTGGAA ATTACGTTGC ATTAGGTACC
AACCAACTGA TGAGTGTTCC CTTTGCTTTA TTTGCAGCTG CAGGAACACC AGGCCCTCAG
GGTGCCGTAG GACCTGCAGG GCCAATAGGG CCGCAAGGCA TGGTGGGTCC TGTAGGTCCG
GTGGGCGCAC AGGGAGCAGT AGGTCCGGCC GGACCAGCAG GACCGCAAGG TGCACAAGGC
CCGGTGGGTG CAAATGGTGT ACTAACAGGA CCTGCCGGTG GCGACCTGTC GGGCACTTAT
CCCAATCCGG TAGTGGCAAA TATCCAAACC AAACCCGTTG CCAACACTGT CCCGGTTTTA
AACGATGTAT TAAAATTTAA TGGTGTGGCC TGGGCGCCGG CATCTATCGG TGTCGGGGGT
TTTATTTTGC CTTTTAATGC AACAGAAAAC AATGCGGCCA GCCTGTTCTC CATTACTAAT
GCAGGCGATG GCACGTCAAT AGAAGGAATA AACAACACCA CAACTAGCAG CATCGCCGCC
ATACGAGGTA TTGTAAGCGC AACAAATCCA GGTGGCTTTT CCAGCGCCGT ACGCGGCATC
AACAACGGAA CGGGCGGTTT GGGCATAGGC GTGTGGGGTT CTCAGGCCGG CTCGGGCTGG
GGTATTTACG GTGTTACACC AAATGGCCTC GGTGTATATG GCAATAGCTC GGCCGGTGGA
ACAGGTGTTT ATGCCAATAG CAATACCGGC ACAGGTCTAA TCGCAACCAG CAATAACGGG
GTTGCAGCAG ACATAACGAT TTTAAACAAT GCCAACAACA GTACTGCATT AACAGTGAGT
ACATTGGGCA ACGGAACCAC CATTAACGCA ACAGCCTCTG GCAATGGCGT TGCTGTAAAA
GCCAACAGCA CCGGAGGAAA TGCTGTAGAT GCAACAACTA ATGTACAGAC AGCCGCAGCC
GTAATTGGTC GTAATTATGT CAATGGCGAA GCAGTAGTAG GGCTTGCCAA GAGCGATATT
GCCGGCGCCG TAGTGGGTCG GAACGACGGT GGCGGATATG GTGTTCACGG CTTTGTATCC
GGCAATACCA CCGGTACAGG CATAGGCGTA TATGGCCGGG TGGGTCTCGG CGGAGGTACC
GGACGTGCCG CAAAATTTGA GAATTTCAGT AAAACCAATA CGCAGAATAC ACTTGAAGCT
TATACCATAA GCAATGGCGA TCCGGGCGAT CCGGGTGCAG GAGCAGCAGG ATCATTTATA
GTTGACAATA CAAACAGCGT ATCACCTGGA GTAAAAGCAA GTGTGAATAC CATATTTGGC
AATTACGGGG CAAGCGCCAT ACTCGCTGAA TCTACTGGCA CAGGCGGTTT CGCCGGAATA
TTTCGAAGTA CAAATACATC AGGTAACGGA AATTCATTGA TTTCAATAAA CGATGGGAAT
GGCAATGCGA TCACAGCCAA CGTTAAAAAA AACGGGAATG CCGTAGAAGC GAATGTAAAT
GGTACTGGTA ATGCCATTTA TGGCTGGGTT CCTACTTTTT CAACTGGTAA AGCAGCAAGA
TTTGAAAATT TCAATGAAGC CAATAACAAC AGTTTATTGT CTGCAAAAAC AGTAGGTAAC
GGCATTGCAG GAGATTTTAT AGTTGACAAT ACGTCAGGCA CTTCCGCTGC CGTCAAAGGA
GAAGTCAACT CTCAGTTTTC CAACTTTGGT ACTGCAGGGT TGATGGGTGT TTCCTCAGGT
ACCGGTGGCT TCGGCGCTTT GTTCTATGCT TCCAATCCTA TTGGAAACTC ACCTGCAGCT
ATTGCTATTG CAAAAGGTAA CGGAAACGGG GTCACTGCCA GCGCAGACAA GCTCGGAGAC
GGTTTAGAAG CCGTCGCTAA TGGTAGTGGC AGAGCTGTAT TTGGCTGGGT TCCAAGTTTT
GGCACAGGCA AGGCCGCACA ATTCAGCAAT TACAATGATG GAAATGCCAA TGAAACAGTG
TACGTTAGTA ACGATGGAAC AGGCACTGCT TTACGTGTCC ACCACAAAGG CCCCTCAGGT
AACATTGCTG TTTTCCAAAC CGGCAATACC GCTGCCGGAA CCAACGTTAT CCGTTTCGAT
AAAACCGGCA AAGGCTTTTT TAACGGTGGT ACCCAGTTAG GCGGTGCCGA TCTTGCAGAA
ATGTTTGATG TAACAGGTGG CAATCTTGCT GCTTATGAAC CCGGAGATGT CATGATCATT
TCCGTTTCAC AGGACAGGGC TATGGAGAAA TCTGCAGAAC CCTACTCCAC ACTGGTAGCA
GGCGTTTATG CAACCAAACC AGGCCTCATG CTCACAGAAG GAGATGCTAC ACTAGACATT
ACGGATAAAA TGCCTTTGGG TGTTGTAGGC GTAATCCCGA CAAAAGTTTG CGACGAGGGC
GGGGCCATCA AACGCGGCGA TCTGCTGGTT ACCTCCAGCA AACCAGGTTA TGCCATGAAA
GGAGATTTAG AAAAAGTTAA ACCCGGTCAG GTCATTGGTA AAGCATTGCA GGAACTCTCT
TCCGGCAATG GCAAAATAAA AGTATTGGTA AATGTTAAAT AA
 
Protein sequence
MKNFTIFIFL IVLSAFQNAS AQSGLTGINY QGVARNTNGT VLSNQAVKVK ISVLGGNPNG 
PVQYMEEHAL NTNALGLFTL QIGKGTALTG TFAAIPWQNA NQYAKVEMAI TGGNYVALGT
NQLMSVPFAL FAAAGTPGPQ GAVGPAGPIG PQGMVGPVGP VGAQGAVGPA GPAGPQGAQG
PVGANGVLTG PAGGDLSGTY PNPVVANIQT KPVANTVPVL NDVLKFNGVA WAPASIGVGG
FILPFNATEN NAASLFSITN AGDGTSIEGI NNTTTSSIAA IRGIVSATNP GGFSSAVRGI
NNGTGGLGIG VWGSQAGSGW GIYGVTPNGL GVYGNSSAGG TGVYANSNTG TGLIATSNNG
VAADITILNN ANNSTALTVS TLGNGTTINA TASGNGVAVK ANSTGGNAVD ATTNVQTAAA
VIGRNYVNGE AVVGLAKSDI AGAVVGRNDG GGYGVHGFVS GNTTGTGIGV YGRVGLGGGT
GRAAKFENFS KTNTQNTLEA YTISNGDPGD PGAGAAGSFI VDNTNSVSPG VKASVNTIFG
NYGASAILAE STGTGGFAGI FRSTNTSGNG NSLISINDGN GNAITANVKK NGNAVEANVN
GTGNAIYGWV PTFSTGKAAR FENFNEANNN SLLSAKTVGN GIAGDFIVDN TSGTSAAVKG
EVNSQFSNFG TAGLMGVSSG TGGFGALFYA SNPIGNSPAA IAIAKGNGNG VTASADKLGD
GLEAVANGSG RAVFGWVPSF GTGKAAQFSN YNDGNANETV YVSNDGTGTA LRVHHKGPSG
NIAVFQTGNT AAGTNVIRFD KTGKGFFNGG TQLGGADLAE MFDVTGGNLA AYEPGDVMII
SVSQDRAMEK SAEPYSTLVA GVYATKPGLM LTEGDATLDI TDKMPLGVVG VIPTKVCDEG
GAIKRGDLLV TSSKPGYAMK GDLEKVKPGQ VIGKALQELS SGNGKIKVLV NVK