| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1670 |
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| Symbol | |
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| ID | 8252772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1969764 |
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| End bp | 1970708 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935322 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091943 |
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| Protein GI | 255531571 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.622556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.155323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAT ATATCCAATT TCATCTGGCG GCTATTCAAT CGGAAGTTTT AACACCTGGT
ACGCTGAGCA ATCAGAGTAA GATGCCACTG CGTATAGCGA TGGCACAAAA GCTTATTACC
CAGGAAGGGG CTTATATCAT CCAGTCTGTA AGCCATTACC TGGCCCATTT AAAGTTATTT
GAAGCAGTAT TAAATGCTGA TGCAAGCCTG AAATATACCA TAGCAGAACC GGCATTTTTG
TTGTTTGCCG ACCTGAGCCG AAACTCCTGC CAGTTGTGTT ACCGCCCCGC AGGTGAATAT
GAACTACAGC TACTGGTGGG GATGAACCAG TTTTTGATTG CTTCTTTACG GACAGACTGG
TTGATTTACA AATGCCAGCA TCTAGCCGTA CTTAGTTCCT TTACCAGTTC TTTAGAGCGG
GCTGCTGATC AACCCAAAGA TTTGCCTGCT TTTGGTATGG CTGCCAGCTT ATTCAGGTCT
TTAAAAATGA TGGATAACCG CATAAAAGAT ATGGGGATGG ATAGCGAGGG CTATGTGTTT
ATCAACGAAT GCATCAATAA GTACTACCAT AGGCTGATTG GCTCGGATAC CATAAACGCC
TATTACCAGG AAAAGGGTAG GGCACTGGTT GCCTTTGTAA AAGAAAACTT TGCCACACCA
CTGGTGGATG ATATGCCTGC ACTGGCCAGC AGGTTTATGG TATCGGAAAG AACGCTTGCC
CGTTTGGCAA AGCTGACTTT CGGAATTCCC CTGCATGAGC AGGTGATCAA TACCAGAATG
ACTTTTGCTT ACAGCCAGTT AGTTACTACT GCTAAACCCA TTTATGAAAT TGCCGCGCTT
AGTGGTTACC AGGACCCACA TTACTTTAGT AAAGCCTTTA AAAAATACCA TGGTATTTCG
CCAAAAGCTG TGGAAAGACC TGTTAAATTG TTGCTTGCTA TCTGA
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| Protein sequence | MQAYIQFHLA AIQSEVLTPG TLSNQSKMPL RIAMAQKLIT QEGAYIIQSV SHYLAHLKLF
EAVLNADASL KYTIAEPAFL LFADLSRNSC QLCYRPAGEY ELQLLVGMNQ FLIASLRTDW
LIYKCQHLAV LSSFTSSLER AADQPKDLPA FGMAASLFRS LKMMDNRIKD MGMDSEGYVF
INECINKYYH RLIGSDTINA YYQEKGRALV AFVKENFATP LVDDMPALAS RFMVSERTLA
RLAKLTFGIP LHEQVINTRM TFAYSQLVTT AKPIYEIAAL SGYQDPHYFS KAFKKYHGIS
PKAVERPVKL LLAI
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