Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1660 |
Symbol | |
ID | 8252762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1964151 |
End bp | 1965377 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935313 |
Product | FecR protein |
Protein accession | YP_003091934 |
Protein GI | 255531562 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.15586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAG ATCATTTATA TGAATTATTA AGGAAATACA AAAGCGGCCT TTGCAATGCA GAGGAAAAAG CTATTGTAGA AAATTGGTTT CTTACCCTTG GGGAAGAACC AACCGAATAT TCAGAAGATG AGATTGAACA CAGCCTGGAA GAAATATGGG AAGCCATGCC CACTAACCAG ATTCCTGTAA AAAAAATCAA CTGGCCTCTT CGTGTAGCTA CAATAGCTGC AGCCATTGTA GTGATGCTTG GTGTATGGAC TTTACTGTTT GTTAAAACAC CTTCACAGAC AGATTGCAAT TGTGATGAGG ACATTAAACC CGGAACGAAC ACAGCAACCC TAACCTTGCC CAACGGAAAA AAAATTGACC TGAGCGATGT TAAAAACGGA GAGCTGGCGA TAGATCAGGG TGTAAAGATC ATTAAACAGT CAGACGGACA ATTGCTTTAC CAGTTTAACC CCGATGCGGT TAAAACCATC ACTCCAGGGC AAAGAGACTC TGTCCCTGCA TTGGTATTGC CTGGAGGTTC TTCCTCAAAT CCCTTAAGTG GCTTAAATTC TTTAACCACC CCAAAGGGAG GACAATATCA TATCGCCCTA CCCGATGGCA CCAATGTTTG GCTCAATGCC GGTTCTACAC TTAAATTCCC ATCTACTTTT GAAGGGCTTG CCGAACGCAG AGTATTACTC ATTGGTGAGG CCTACTTTGA GGTATCTCAT GTAAAGTCCC TGTTTGGCAT GCAAAAACGG GCAAGAAAAA TGCCTTTCAT CGTTAAAACT GCTACCCAGG AGGTGACCGT ATTGGGCACC CATTTTAATA TTAACAGTTA TCCGGACGAA CCGGACACTA AAACAACGCT GCTTGAAGGG GCTGTAGGAA TTACGGCCCC TCTTTTACAA AAAGAGACAA CTATCCTTAA ACCCGAAGAT CAGGCCGTAA ACAACGGTGC TGAAATCAAA GTTAAAAAGG TAGATACAGA TTTGGCTGTA GCATGGATAA AGGGCGAATT TATGTTCAGG AATGAAGACC TGCAGAGCAT TATGAGAAAG GTAGCACGTT GGTATAATGT AGAGGTGATC TATGAAAACA AAGATGCCGG TAATGAAATG TTTGGGGGAA CAATTTCACG GTATGATAAA ATATCCAGGG TATTAAATGC CCTCGAAGGA ACAAGTAATA TAAGATTTAA GGTAACCGGA AGAAAAGTTT TCGTTACCAG GCTGTAG
|
Protein sequence | MEKDHLYELL RKYKSGLCNA EEKAIVENWF LTLGEEPTEY SEDEIEHSLE EIWEAMPTNQ IPVKKINWPL RVATIAAAIV VMLGVWTLLF VKTPSQTDCN CDEDIKPGTN TATLTLPNGK KIDLSDVKNG ELAIDQGVKI IKQSDGQLLY QFNPDAVKTI TPGQRDSVPA LVLPGGSSSN PLSGLNSLTT PKGGQYHIAL PDGTNVWLNA GSTLKFPSTF EGLAERRVLL IGEAYFEVSH VKSLFGMQKR ARKMPFIVKT ATQEVTVLGT HFNINSYPDE PDTKTTLLEG AVGITAPLLQ KETTILKPED QAVNNGAEIK VKKVDTDLAV AWIKGEFMFR NEDLQSIMRK VARWYNVEVI YENKDAGNEM FGGTISRYDK ISRVLNALEG TSNIRFKVTG RKVFVTRL
|
| |