| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1658 |
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| Symbol | |
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| ID | 8252760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1959121 |
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| End bp | 1960515 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 644935311 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003091932 |
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| Protein GI | 255531560 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.175275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.106302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCGA AAATATTTAA GATAGCTATA TTCGCCATTG CAGTTTTTGA GTTTTCTTGT
TCAAATTTTT TAGAAATATC TCCACCAAAG GATAAATTAA TTTCTGAAAC TGTATTCAAA
ACCGACGAGA TTGCAATATC TGCAATGACA GGGGTTTACA GAAGTATGGC AGTTAATGGT
TATGCTTCTG GGGATTTTTC AAGCATAAAC TCAGTTTGTG GTGCAGCGGC GGATGAATTG
ATTGGCTATG AGCCTATCAT ATCAGAGTTT TATGAAAACC AAATCTCACC AAGTAATGCT
TATATAGGCT CCGGACTATA TGCAACTCCT TTTAAAACTA TTTATACTAC TAATGCAATT
TTAGAAGGTT TAACTTCAAT AAATGGTGTT ACACCTCCAG TAAAAACGCA ATTAATGGGT
GAAGCATATT TCGTAAGAGC ATTTGTATAT TTCTATTTAG TAAATCTCTA TGGAAATGTA
CCCATACAAC TTACAACAGA TTATAGAATT ACCCAAAATG CTCAACGAAA GCCTGTTGAA
GCAGTTTACC AACAAATATT AACTGATCTT AAAACTGCAG AAGGTCTTTT AACAGATAGT
TATGTTACAA CGGAACGAAT AAGACCAAAT AAATCAGCTG TGCAAGCTTT GCTGGCCAGA
GTCTATTTGT ATCTTAAAGA CTGGGAAAAT GCTGAGAAAT ACGCATCATT AGTGATAGAA
AAAACAGGTA CATATAGCCT TGTCGATTTA GATGCTATAT TTTTAAAAAA TAGCAATGAA
GCAATTTGGC AACTCATGCC TGCTGCAAAT ACAAATAGCA AAGATGGAAA TCTTTTTATC
TTAACAACCG TTCCTTTTTA CGTTTCACTT AAAGATGCCT TTGTAAATAA TGCTTTTGAC
CCTAATGACA AAAGAAAATT AGCTTGGGTA AGAAACTTCA CGAACTCAAC AGGTACTTAT
TATTATCCAT TTAAATATAA AATAAGATCT TCCACAACCG TAACAGAATA TTCAATGGTT
TTAAGATTAG CGGAACAATA TCTAATTAGA GCAGAAGCAA GAATCAATCA AGAAAAAATT
GAAATAGGAA TTCAAGACTT GAATGCTTTA AGAACTAGAG CAAGATTGTC TACTGCTTAT
AGTACTACAA GTCCTCTATC ACTTTTATCT CTTACTCTAA GTAAGACAGA AGCCTTATCC
GCTTTAGAAC GGGAAAGAAG AGTCGAACTT TTTTCAGAAT GGGGACATAG GTGGTTAGAC
TTAAAACGTA CCAACAAGGC TAATGAAATC TTGAGCTTAT TGAAACCAAA ATGGCAGAAT
ACTGATATCC TATTTCCTAT ACCAACATTA GAATTAACAA CAAATTCTGC TATAAAACAA
AATGAAGGTT ACTGA
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| Protein sequence | MKSKIFKIAI FAIAVFEFSC SNFLEISPPK DKLISETVFK TDEIAISAMT GVYRSMAVNG
YASGDFSSIN SVCGAAADEL IGYEPIISEF YENQISPSNA YIGSGLYATP FKTIYTTNAI
LEGLTSINGV TPPVKTQLMG EAYFVRAFVY FYLVNLYGNV PIQLTTDYRI TQNAQRKPVE
AVYQQILTDL KTAEGLLTDS YVTTERIRPN KSAVQALLAR VYLYLKDWEN AEKYASLVIE
KTGTYSLVDL DAIFLKNSNE AIWQLMPAAN TNSKDGNLFI LTTVPFYVSL KDAFVNNAFD
PNDKRKLAWV RNFTNSTGTY YYPFKYKIRS STTVTEYSMV LRLAEQYLIR AEARINQEKI
EIGIQDLNAL RTRARLSTAY STTSPLSLLS LTLSKTEALS ALERERRVEL FSEWGHRWLD
LKRTNKANEI LSLLKPKWQN TDILFPIPTL ELTTNSAIKQ NEGY
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