Gene Phep_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1648 
Symbol 
ID8252750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1948365 
End bp1950488 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content41% 
IMG OID644935301 
Producthypothetical protein 
Protein accessionYP_003091922 
Protein GI255531550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.255436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0205712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGG GTATGGGGGA AGTTAAGGGG CAGAGAAAGT ATGCGACAGC TATTTCCAAA 
ATTTCTGCTA CTACAGGAGT TAATATAACT AATGAAAGTA ACGCGATTAC AAATAATGAA
AACAATGCCC CGACAGAAAC CCCACCTCTA GCCAACATAA CAGTTACAGG CACTGGAGGA
TTAACCGGAT CATCTGCATC AGGATGGATT GGACTAGGCT TTTCTTCCAT TCCATCTAAT
ACTATCGTTT TCATCAAAGT CTCAAGCCCG ATATATGCCA ATGCCGGAGG AACAATTAAT
GCTCAGGCAT ATAATAATAC ATCATTAGTT ACCAGCACAT CTACACTAAT TACAGCAGCT
GATGGGACAC TATATTACAC AGTAACGGCT AATGCAACAT TTAATACTGT GAGACTGAAT
GTTACAGGGA ATGGAGGGCT AATACCGGGA GCCGGCACCG TTAGTATAAA TGTTCTTTCT
GCATTCTACA ATACAACAAA TTCTTCTGAT TGTGGAATAG TTTTAGGAAC TGATGGTTAT
AATGTTTCAA ATCCTCAAAG GGCGATAGAT GGTATCAAAA CAACCTTTTC AACACTAACA
CCTGGAGCAT TACTAAGTTC AGCCAATCAA AACTTTTATT TTTCAAGTCC TTCAAATTCA
AGCGACGAGG TAAAACTGAC CTTATCTGCT CCAGCCGCTG CATTGTCAGT AACGTTATTA
AATAATATAA CCGTCTCTGC ATATAATGGA AGTTCGTCAA CTGCGGTGTG GAGCATGGGA
CTTGGAAATA TTTTAAGTGC TGATTTATTA GGTCTCTTAA GCAATGCAAC ACCTGTAACT
TTCTCCATAG CCCCAGGAGT TGCGTTCGAC AGAGTTACTG TTAATTTTGG ATCTGTTCTT
AGTCTTTTCT CAAATTTATA TATCCATGAA ATAGAAAGAA CACCTAAGAA ACCATCTTTT
ACTCCAATAT CCTTACAAAA CGTAACTGCC TGTGCTGGTA TTCCAATAAC ATTGACACCT
GATGCACCTG CTGCCGGAAA CACATTTAAA TGGTATGACT CAGCATCAGA TGGCGCACTT
TTATCAACTG GTAGCAGCTA TATGGTAAGC CCCTTGGTGA GTACCACATA TTATGTTGCT
ACATCAAAAT CGACTTGTAC TGGCGAATCA ATAAGGATTC CGGTAAACGT AACTGTGAAT
TCCATAAGTG GGGGCGTAAT AGCTACCGAT CAAACCATCT GTAACAATTC AATTCCGGCT
CCATTTACAA GTACTGCTGC TGCTACCATT ACGTCTGGTG GAACCGCTGC AACCTATCAA
TGGCAAAAAT CGACCGACAA CAATACGTTT ACCAACATAA CAAGCAATGC TACAAATGTG
AGTTATACCG AAACTGCAAC ACTTACCCAG ACTACCTATT ACCGCAGGGT AGCCACGTCA
ACTTTAAACA GTGTAGCCTG TTCAGCAAAC AGCAATGTAA TCACAGTAAC GGTCAATTCA
ATTACAGCAG GAACAATTGG AACAAATCAA ACTATATGTT TAGGATCAGC TCCTGCAGCT
TTCACCAGTT TAACAGGTGC TACAGGAACT GGAACAACTA CTTACCAATG GCAAAAATCA
ACTGACAATA ATACATTTAC CAATATCGCC AGTGCTATAG CGGCAACATA CACAGAAACC
GCAGCGCCAG CACAAACCAC TTATTACCGA AGAGTGGCAA CTTCAACTTT AAACACTGTG
ACTTGTTCAG CAAATAGTGC ATCAATTACT GTCACAGTTG CCCCTATTCC ATCAATCACT
GTAGGCACAA TTGCAAATGT ATGCCAGGAA ACTGCCACTA CTACTTTGCC TTATAGTGCT
ACAACGGGAA GCCCGACGAC CTATAGCATA GTTTGGAATG CCTATGCAAT GGGCAAGGGT
TTTACCAATG TAAATGGCGC AACATTAACT GCAAGCCCAA TCATAATTAA TAAACCAGTA
GGTACTACTG TAACTCCGGG GTCATATAGT GGAACATTGA CAGTAAGTAA TGCAAACTGT
ACAAGTTCCT CACAACCCAT CACATTTACA GTATTACCAC GACCAGCAAC TCCAAATCTA
ATCTTAACAA CGAATCCTCA ATAA
 
Protein sequence
MVAGMGEVKG QRKYATAISK ISATTGVNIT NESNAITNNE NNAPTETPPL ANITVTGTGG 
LTGSSASGWI GLGFSSIPSN TIVFIKVSSP IYANAGGTIN AQAYNNTSLV TSTSTLITAA
DGTLYYTVTA NATFNTVRLN VTGNGGLIPG AGTVSINVLS AFYNTTNSSD CGIVLGTDGY
NVSNPQRAID GIKTTFSTLT PGALLSSANQ NFYFSSPSNS SDEVKLTLSA PAAALSVTLL
NNITVSAYNG SSSTAVWSMG LGNILSADLL GLLSNATPVT FSIAPGVAFD RVTVNFGSVL
SLFSNLYIHE IERTPKKPSF TPISLQNVTA CAGIPITLTP DAPAAGNTFK WYDSASDGAL
LSTGSSYMVS PLVSTTYYVA TSKSTCTGES IRIPVNVTVN SISGGVIATD QTICNNSIPA
PFTSTAAATI TSGGTAATYQ WQKSTDNNTF TNITSNATNV SYTETATLTQ TTYYRRVATS
TLNSVACSAN SNVITVTVNS ITAGTIGTNQ TICLGSAPAA FTSLTGATGT GTTTYQWQKS
TDNNTFTNIA SAIAATYTET AAPAQTTYYR RVATSTLNTV TCSANSASIT VTVAPIPSIT
VGTIANVCQE TATTTLPYSA TTGSPTTYSI VWNAYAMGKG FTNVNGATLT ASPIIINKPV
GTTVTPGSYS GTLTVSNANC TSSSQPITFT VLPRPATPNL ILTTNPQ