| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1646 |
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| Symbol | |
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| ID | 8252748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1946663 |
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| End bp | 1947610 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935299 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003091920 |
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| Protein GI | 255531548 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0137205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTAACA GAAAAACCAA TTTTGTGTCA AGCTTGCTGT TGCTAAGTGC AACGGCAGGC
TTTGCGCAAT CTGGTAGTTC GCAAACCGTT ACTATTCCTC AAGGGAATTC GGTAAAATTG
CGGGCCAGTT CTGTTAACGC AACCGCTTAC CAATGGATTA AAGATGGTAC TGCAATTACC
GGTGCCACAT CTGCTGATTA TAATGTACTG CTTGCTGGTA CGTATACAGT GGTTTCTTTT
AACGCTGAAG GCTGCGCTTC GGACATCTCA GCTCCTGTTA TTGTAAACAT TGGCACCCCC
AATGCACTTA CTGCCGATCT GATGATCAGC AAAAACTCGG AATTAAGGGC CGTAACCATT
AACGATACTT TTGAATACCT GATCAAGGTG AAAAACAATG GTACCGCAAC GGCTACAATC
GTAAAAGTAC AGGATATTTT ACCTGAAGAA CTCATTTTTC AACAGCTGAT GACACCCACT
CTTGGGCTGG CCAATTACAA CCAGGGCAGC AAAACCGTTT TATGGGAGAT CAGCAAGCTG
GACAATGGCG AAAGTGCCGA TCTGAAAATC AAAGTAAAAG CGGTTAAAGC CGGGATCATC
AGAAATACAG CCACGGTAAG CGCTAATGAA ACTGATCCTG ATCTGAAAAA CAACAGCTTT
ACAGATAGTA AATCGGTAGC AGGAATCATC ATCCCTAATG TTTTTACACC TAACGGCGAT
GGTTTAAATG ACACCTTCGA AATACCCGGC CTGGAACTTT ATGAAGCCAA TGAGCTAACC
ATCTTAAATC GATGGGGAGG TACTGTTTAT AACACAAAAG GATACAGGAA CGACTGGACA
GCTATCGGCC TTAATGAGGG TACCTATTTC TACCTGCTAA AACTGAAAAC CGCAGGCAAC
AAATGGGAAA TTTATAAAGG CTATATAACC ATACTACGAA ACAAATAA
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| Protein sequence | MFNRKTNFVS SLLLLSATAG FAQSGSSQTV TIPQGNSVKL RASSVNATAY QWIKDGTAIT
GATSADYNVL LAGTYTVVSF NAEGCASDIS APVIVNIGTP NALTADLMIS KNSELRAVTI
NDTFEYLIKV KNNGTATATI VKVQDILPEE LIFQQLMTPT LGLANYNQGS KTVLWEISKL
DNGESADLKI KVKAVKAGII RNTATVSANE TDPDLKNNSF TDSKSVAGII IPNVFTPNGD
GLNDTFEIPG LELYEANELT ILNRWGGTVY NTKGYRNDWT AIGLNEGTYF YLLKLKTAGN
KWEIYKGYIT ILRNK
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