Gene Phep_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1641 
Symbol 
ID8252743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1942247 
End bp1942693 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID644935295 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 
Protein accessionYP_003091916 
Protein GI255531544 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.012004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG CAGAGATCTT AGCACACTTA CCTTACACCA AACCTTTTTT ATTTGTAGAT 
GAGCTGGAAG CAATTGACGA AAACGGCGTA ACCGGCTCTT ATACTTTTGA TGCAGATCTG
GATTTTTATA AAGGACATTT TAAAGACCAT CCCGTAACAC CCGGTGTGAT ATTAACGGAA
ACCATGGCGC AGATTGGCCT GGTTTGCCTG GGTATCTATT TATCGGGCAG TGCCGAAGGC
GGAATGCCGG GCCATGTGAT GCTCACTTCT ACGGCTATCG ACTTTATGAA GCCTGTTTTT
CCGGGAGAAA AAGTAACCGT AAATGCACAA AAGGTATATT TCAGGTTTAA AAAGCTAAAT
TGTACAGTAC AAATGACCAA TGCCGCCGGC GAAGTAGTTT GTAAAGGCAC CATTGCCGGC
ATGGTGACCA ATAAAATGAA TGCATAA
 
Protein sequence
MNKAEILAHL PYTKPFLFVD ELEAIDENGV TGSYTFDADL DFYKGHFKDH PVTPGVILTE 
TMAQIGLVCL GIYLSGSAEG GMPGHVMLTS TAIDFMKPVF PGEKVTVNAQ KVYFRFKKLN
CTVQMTNAAG EVVCKGTIAG MVTNKMNA