Gene Phep_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1634 
Symbol 
ID8252736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1935726 
End bp1936217 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content39% 
IMG OID644935288 
Productputative nucleotide-binding protein 
Protein accessionYP_003091909 
Protein GI255531537 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0454282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTT TCGATATTGT AAGCAAAGTA GACGCGCAAA CATTAGACAA CGCGATGAAC 
AATGCAAAAA AAGAGATCTT AAACCGTTAT GATTTCAGTA CTTCAAAAAG TACCATCGAC
CACGATAAAA AGACCAATGT AATTACCATT GTTACCGAAG ATGACATGCG TTTAAAAGCA
ATTCAGGATG CCATCATCTC AAGGATGATC AAGCAAAACC TGGATGCAAA AAGTTTGGAT
TTTGGTAAGG AACAATATGC GTCCGGAAAC ATGATCAGGA AAGAAATTTC GGTAAAAGAA
GGTATAGACA AAGAAACTGC AAAGAAAATT GTGGCAAAAA TAAAAGCCAG CGGACTAAAA
GTACAGGCTT CTATGATGGA TGACCAGGTG CGGGTGCAAA GCAAAAGTAT AGACGACCTG
CAAGGTGTAA TTGCCCTTTG CAAAAAAGAA GATTTTGGTC AGCCGCTGCA GTTCATCAAC
ATGCGGAACT AA
 
Protein sequence
MPTFDIVSKV DAQTLDNAMN NAKKEILNRY DFSTSKSTID HDKKTNVITI VTEDDMRLKA 
IQDAIISRMI KQNLDAKSLD FGKEQYASGN MIRKEISVKE GIDKETAKKI VAKIKASGLK
VQASMMDDQV RVQSKSIDDL QGVIALCKKE DFGQPLQFIN MRN