Gene Phep_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1624 
Symbol 
ID8252726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1925536 
End bp1925847 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content38% 
IMG OID644935278 
Productribosomal protein L21 
Protein accessionYP_003091899 
Protein GI255531527 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.511326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAA TAGTAAATAT AGCAGGACAG CAATTCAAAG TTGCAAAAGA CCAGCACCTT 
TTTGTACACC GTTTACAAGG GGATGAAGGC GCTAGTATTG AATTTGACAA TGTATTGTTG
GTTGAAGATG GTGGTAAAAT CTCTGTAGGA GCTCCTGCAT TGAAAGGCGC AACTGTTTCA
GCTAAAATCG TGTCTCATTT AAAAGGTGAT AAAGTAATCG TTTTCAAAAA GAAACGCAGA
AAAGGTTACA AAAAGAAAAA CGGTCACCGT CAGTATTTCA CCAAGATCCA GATCTCTGGT
ATCAGTTTAT AA
 
Protein sequence
MYAIVNIAGQ QFKVAKDQHL FVHRLQGDEG ASIEFDNVLL VEDGGKISVG APALKGATVS 
AKIVSHLKGD KVIVFKKKRR KGYKKKNGHR QYFTKIQISG ISL