| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1619 |
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| Symbol | |
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| ID | 8252721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1921250 |
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| End bp | 1922110 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935273 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091894 |
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| Protein GI | 255531522 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0667714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGT ATAACAGGAT CCTGATCAAT AAGAATGAGA TCATAAGTGA AGTTACTTGT
GATGCCTATT ATCCGATGCT TACGGGAAAG TATGCTTTTA ATGTAGTATT TAATGGCGAA
GCAAACTATA CCATCGAGAA GCGGCAGATC ACCCTTGTGC CCGGAAGTTT TATTTTCCTG
AACCACGATA CCTGTTATTC CCATAAAATA GATTCATCAG TAGAGGTAAA CACACTTTCT
GTGCTGTTTG ATCCTGGTTT TGTGCAGGAT TTTGAATATT CCTATCGGGC TGAAGCAAAA
AAACTGCTGG ACAATCCTGC CGACCTGAAA AGTGGGCAGC CGCGTTTTAT GGAATCAATT
TATACGCTCC AGGGCGATGT TAAATTTAAT TTACAGCACC TTACCCGACA TTTGGAAAGC
GGTACCAATG ACCAGCTGCT TTTAAACGAG TATTTACACC ATTGCCTGAT CAATTATTAT
AACCTGTACC ATTCAGAAAT AGAGCGCAGG GAAGCTGCCC TGAAATTTTT GAGCCGTACC
ACCAAAACGG AGATCATAAG AAGGTTGTCA ATTGCTAAAG ATTATATGAT CAGCAATTAC
AACAAGAGCA TACGCCTTGA CGACATTGCA CAGATGGCCT GTTTATCGGT TAATCACTTG
CTGCGTACTT TTAAGCAGGC CTATCAGCAA TCGCCCCACC AGTTTCTTAC CAAGATCAGG
CTCCAGCAGG CAAAGCACCT GTTAAAGCAT ACCGACTATC CGGTAAACGA AATTGTAGAT
ATAGTAGGCT TTGAATGTCC AAGCTCATTT ATCAGGCTGT TCAGAAACGC TTTCAATGTT
ACGCCAGGTC AGTACAGGTA A
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| Protein sequence | MMKYNRILIN KNEIISEVTC DAYYPMLTGK YAFNVVFNGE ANYTIEKRQI TLVPGSFIFL
NHDTCYSHKI DSSVEVNTLS VLFDPGFVQD FEYSYRAEAK KLLDNPADLK SGQPRFMESI
YTLQGDVKFN LQHLTRHLES GTNDQLLLNE YLHHCLINYY NLYHSEIERR EAALKFLSRT
TKTEIIRRLS IAKDYMISNY NKSIRLDDIA QMACLSVNHL LRTFKQAYQQ SPHQFLTKIR
LQQAKHLLKH TDYPVNEIVD IVGFECPSSF IRLFRNAFNV TPGQYR
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