Gene Phep_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1617 
Symbol 
ID8252719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1917643 
End bp1920570 
Gene Length2928 bp 
Protein Length975 aa 
Translation table11 
GC content42% 
IMG OID644935271 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003091892 
Protein GI255531520 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.269144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTCC TGCTTGCCAG TGGTCTTCAG GCCTTCAGTC AGCGGTACAA CTTTGAGCAT 
TACAATATCG AGGACGGTCT GGTCCAGTCG CAGGTAACGG CCATTACCCA GGACAAACAA
AGACGGTTAT GGATAGCCAC TTTGGGGGGA CTAAGCTGTT TCAATGGTAA CCAGTTCATT
AATTTTGGGA AAACTGACGG CTTAAACAGC AATTTTATTT TATCGCTGGC AGTAAATGAC
CAAAATAGCC TCTTTATTGG TTCCGGACGA GGGTTATCTG CTTATAACGG CTTTTCCTTT
TATCATTACA AGGAGACAAA CAACTGGACT GACATGTTGG TTGCCGGCAC CGGCAACATG
GTATATGGCC TGTCAGACCG GCATCTTTTT AAAACAAACA GGTCCGCAAC TGAACGCGTA
AACATTAGCC GCGACACAGC CGAAATGGTA ACCACCCTGA CTACCGACCA GGGCGGAAAA
ATATGGGCAG CAGTATATAC ACATGGCATA TACAGCCTGG AAGGAAACAA ATGGCAGGCT
AAAATAACTG GGGCTGCTGT AAAAAATTTA GTGGTCACCG GGCTTTTAAT AGATAAATTT
GTTAAAGATA AAATCTGGTT GCTGACAACC ACTGGCATAT TCCTGTCAGA ACACGGAAAA
CTGCTCAGCA GGTATGCCGG TAAGATTAAA AAAGCTACAG CAATCCTGCA GGACGAAAAA
GGAAATATCT GGCTGGGTAC AAACAAGGGC GCCTGGTACA TCAGCACAGA TCATGAAATC
TATTTTAATG CTAAAAATGG ATTTACCGAT AATGTGGTTA AACAAATATT CAGGGATGCA
GAAAACAACA TCTGGTTTGG TACAGACGGC TCAGGGATTT ACAGGTTTAA CAGCAATGGT
TATGTCACAT TCGACGAATC GCAGGGCTTA CAGAACAATA TTGTAATGAG TATTGTGAAT
GGCCCCAAAC CAGACGAAAT CTGGCTGGGC ACTTACGATG GCCTGTTTAG CCAGCAAAAC
AACCAGATCA GAAGGATCAG CATCCCTTCC GACAATGAGG ATACAAAAAG GATCAATGTA
TTGTTAAAAG ACAGCAAAAA TGATATATGG GTAGGTACAG TGGGTGGTGG TTTATGGCTT
TATCATAAAA ACAGGTTTAA ACGCATAGAC CATGAAAGTC GCGGTATAGC CTGTAATGCC
ATTATGGAAG ACAGGGACCA CAACATCTGG TTATCTACAA ATACCGGCTG TTTTATGGTA
GACAACCTCA GCAAAAAAAT AAGCCGAATC AGCCCCCGGT TTGGCAGCAG TTTACTTGAA
ATAGGTAAAG ATTCGATAAT AACCGGTACG CAGAACGGTG CTTACCTGGT TAACCATAAA
AAAGAGATCA AACGGTTAAA GTTCAGGCTC ATTGAAGGCT CAAGCATTTT AGCGATGCTC
AAAAATGGTC CTGATGTTTT TTTTGGAACG GCCGACAATG GCCTGATCAT ATGGGATACA
GTAACCGGAA AAGTTAAACA GCTGAGTACT AAAAACGGAC TTTTTTCTGA CCACATCTAT
AGCTTGCTCC TCGATAAAAG GGGAACAATC TGGATAGGGA CCGGCAGGGG CATAAACCGG
CTGAACTCAA AAGACCATAG CCTGATCAAA GGCAATGACG GGAATGCCTT ACTTGTTGAA
TGCAACCAAA ATGCAATTCT GGAGAAAGAT GACAAAATCT GGATAGGAAC AACCAAAGGA
GCAATTGTTC ATTACAACAA AATAAGTCCC TCAGTAGCGG GCACACCCTA CGTTTTCATC
AACTCAGCAG GTGTTTTGTC CCAAAACAAA AAAGGAGATC AGAATAACCT GCAAATTACC
TACAAAGAGC GTGAACTGAA CCAGGAAATA ACACTGCCTT ATGACCACAA TCACCTGAAC
ATCAACTTTA CAGGTATTTA CCTGACCAAT CCTAAAGCAT TGATGTATAC CTACAGGTTA
ATCGGACTGG ATACCACGTA CAGTAAACCC GCTGCCAATT CTTCTATCAA TTATACGGCC
CTGCCACCCG GTAAATATAC CTTTCAGGTT AAAGCCCTTA CTGTTTCCGG AATCGAATCT
GGCAATACCG CAGCCATCCA GTTCCAAATT ACCCCGCCTT ATTATCAGAC CGCCATTTTT
AAGATCTTTA TCCTCTTGGT TATCCTTTTG CTGATCATAC TTTCGGTATA CGTCATCATC
AACCTGAACG AAAGACAACG CAGATTGCGG CTCAAAATAA AACTGGAAGA GCAGTTTAAG
ATCAGAAAAC AAACTGCAGA AGATTTTCAC GACGATCTTG GTAACAAACT TACCCGAATC
TCCGTCTTAT CAGAAGTATT AACCAGTATG ACTGATCAGG ATGACACCGA AAAAAGGGCA
ATCATACAAA AAATAAAAAC CAATGTGAAC GAATTGTATA CCGGAACAAA AGATATCCTC
TGGTCTTTAA ACCCAAAACA CGATACCTTA TGTGAATTGC TGACCCATAT CAGGGAATTT
GGACAGGAGA TGTTTAACGG AACGCCCATA CTTTTTGAAG AAGAAACTTC CCTGAATGAC
ACGGACAGCA GGCTTTCACT CGAAATGAGC AGGAATATCC TGATGATCTT TAAGGAGGCC
ATACACAATG CCTTAAAACA CTCAAAAGCA GATCATGTTA AATTTACAGC AAAGATGGCC
CATGATGTTT TAGACATCAG GCTTGATGAT AACGGGACTG GTTTCGATGT AGCATCTGCC
GGAAACGGTC ATGGGATCAA CAATATGAAT GTCCGGGCCG CCCGGATCAA TGGAATTTTA
AACATTATCT CCAATACTAA AGGAACAACA ATAGCGCTCT CTGTTAAATT TAAAACATCA
AAAAATGCAG AATCAGGCAG AAGCAAGAGT AGTTATCATA GAAGATGA
 
Protein sequence
MLFLLASGLQ AFSQRYNFEH YNIEDGLVQS QVTAITQDKQ RRLWIATLGG LSCFNGNQFI 
NFGKTDGLNS NFILSLAVND QNSLFIGSGR GLSAYNGFSF YHYKETNNWT DMLVAGTGNM
VYGLSDRHLF KTNRSATERV NISRDTAEMV TTLTTDQGGK IWAAVYTHGI YSLEGNKWQA
KITGAAVKNL VVTGLLIDKF VKDKIWLLTT TGIFLSEHGK LLSRYAGKIK KATAILQDEK
GNIWLGTNKG AWYISTDHEI YFNAKNGFTD NVVKQIFRDA ENNIWFGTDG SGIYRFNSNG
YVTFDESQGL QNNIVMSIVN GPKPDEIWLG TYDGLFSQQN NQIRRISIPS DNEDTKRINV
LLKDSKNDIW VGTVGGGLWL YHKNRFKRID HESRGIACNA IMEDRDHNIW LSTNTGCFMV
DNLSKKISRI SPRFGSSLLE IGKDSIITGT QNGAYLVNHK KEIKRLKFRL IEGSSILAML
KNGPDVFFGT ADNGLIIWDT VTGKVKQLST KNGLFSDHIY SLLLDKRGTI WIGTGRGINR
LNSKDHSLIK GNDGNALLVE CNQNAILEKD DKIWIGTTKG AIVHYNKISP SVAGTPYVFI
NSAGVLSQNK KGDQNNLQIT YKERELNQEI TLPYDHNHLN INFTGIYLTN PKALMYTYRL
IGLDTTYSKP AANSSINYTA LPPGKYTFQV KALTVSGIES GNTAAIQFQI TPPYYQTAIF
KIFILLVILL LIILSVYVII NLNERQRRLR LKIKLEEQFK IRKQTAEDFH DDLGNKLTRI
SVLSEVLTSM TDQDDTEKRA IIQKIKTNVN ELYTGTKDIL WSLNPKHDTL CELLTHIREF
GQEMFNGTPI LFEEETSLND TDSRLSLEMS RNILMIFKEA IHNALKHSKA DHVKFTAKMA
HDVLDIRLDD NGTGFDVASA GNGHGINNMN VRAARINGIL NIISNTKGTT IALSVKFKTS
KNAESGRSKS SYHRR