Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1617 |
Symbol | |
ID | 8252719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1917643 |
End bp | 1920570 |
Gene Length | 2928 bp |
Protein Length | 975 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935271 |
Product | ATP-binding region ATPase domain protein |
Protein accession | YP_003091892 |
Protein GI | 255531520 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.269144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTTCC TGCTTGCCAG TGGTCTTCAG GCCTTCAGTC AGCGGTACAA CTTTGAGCAT TACAATATCG AGGACGGTCT GGTCCAGTCG CAGGTAACGG CCATTACCCA GGACAAACAA AGACGGTTAT GGATAGCCAC TTTGGGGGGA CTAAGCTGTT TCAATGGTAA CCAGTTCATT AATTTTGGGA AAACTGACGG CTTAAACAGC AATTTTATTT TATCGCTGGC AGTAAATGAC CAAAATAGCC TCTTTATTGG TTCCGGACGA GGGTTATCTG CTTATAACGG CTTTTCCTTT TATCATTACA AGGAGACAAA CAACTGGACT GACATGTTGG TTGCCGGCAC CGGCAACATG GTATATGGCC TGTCAGACCG GCATCTTTTT AAAACAAACA GGTCCGCAAC TGAACGCGTA AACATTAGCC GCGACACAGC CGAAATGGTA ACCACCCTGA CTACCGACCA GGGCGGAAAA ATATGGGCAG CAGTATATAC ACATGGCATA TACAGCCTGG AAGGAAACAA ATGGCAGGCT AAAATAACTG GGGCTGCTGT AAAAAATTTA GTGGTCACCG GGCTTTTAAT AGATAAATTT GTTAAAGATA AAATCTGGTT GCTGACAACC ACTGGCATAT TCCTGTCAGA ACACGGAAAA CTGCTCAGCA GGTATGCCGG TAAGATTAAA AAAGCTACAG CAATCCTGCA GGACGAAAAA GGAAATATCT GGCTGGGTAC AAACAAGGGC GCCTGGTACA TCAGCACAGA TCATGAAATC TATTTTAATG CTAAAAATGG ATTTACCGAT AATGTGGTTA AACAAATATT CAGGGATGCA GAAAACAACA TCTGGTTTGG TACAGACGGC TCAGGGATTT ACAGGTTTAA CAGCAATGGT TATGTCACAT TCGACGAATC GCAGGGCTTA CAGAACAATA TTGTAATGAG TATTGTGAAT GGCCCCAAAC CAGACGAAAT CTGGCTGGGC ACTTACGATG GCCTGTTTAG CCAGCAAAAC AACCAGATCA GAAGGATCAG CATCCCTTCC GACAATGAGG ATACAAAAAG GATCAATGTA TTGTTAAAAG ACAGCAAAAA TGATATATGG GTAGGTACAG TGGGTGGTGG TTTATGGCTT TATCATAAAA ACAGGTTTAA ACGCATAGAC CATGAAAGTC GCGGTATAGC CTGTAATGCC ATTATGGAAG ACAGGGACCA CAACATCTGG TTATCTACAA ATACCGGCTG TTTTATGGTA GACAACCTCA GCAAAAAAAT AAGCCGAATC AGCCCCCGGT TTGGCAGCAG TTTACTTGAA ATAGGTAAAG ATTCGATAAT AACCGGTACG CAGAACGGTG CTTACCTGGT TAACCATAAA AAAGAGATCA AACGGTTAAA GTTCAGGCTC ATTGAAGGCT CAAGCATTTT AGCGATGCTC AAAAATGGTC CTGATGTTTT TTTTGGAACG GCCGACAATG GCCTGATCAT ATGGGATACA GTAACCGGAA AAGTTAAACA GCTGAGTACT AAAAACGGAC TTTTTTCTGA CCACATCTAT AGCTTGCTCC TCGATAAAAG GGGAACAATC TGGATAGGGA CCGGCAGGGG CATAAACCGG CTGAACTCAA AAGACCATAG CCTGATCAAA GGCAATGACG GGAATGCCTT ACTTGTTGAA TGCAACCAAA ATGCAATTCT GGAGAAAGAT GACAAAATCT GGATAGGAAC AACCAAAGGA GCAATTGTTC ATTACAACAA AATAAGTCCC TCAGTAGCGG GCACACCCTA CGTTTTCATC AACTCAGCAG GTGTTTTGTC CCAAAACAAA AAAGGAGATC AGAATAACCT GCAAATTACC TACAAAGAGC GTGAACTGAA CCAGGAAATA ACACTGCCTT ATGACCACAA TCACCTGAAC ATCAACTTTA CAGGTATTTA CCTGACCAAT CCTAAAGCAT TGATGTATAC CTACAGGTTA ATCGGACTGG ATACCACGTA CAGTAAACCC GCTGCCAATT CTTCTATCAA TTATACGGCC CTGCCACCCG GTAAATATAC CTTTCAGGTT AAAGCCCTTA CTGTTTCCGG AATCGAATCT GGCAATACCG CAGCCATCCA GTTCCAAATT ACCCCGCCTT ATTATCAGAC CGCCATTTTT AAGATCTTTA TCCTCTTGGT TATCCTTTTG CTGATCATAC TTTCGGTATA CGTCATCATC AACCTGAACG AAAGACAACG CAGATTGCGG CTCAAAATAA AACTGGAAGA GCAGTTTAAG ATCAGAAAAC AAACTGCAGA AGATTTTCAC GACGATCTTG GTAACAAACT TACCCGAATC TCCGTCTTAT CAGAAGTATT AACCAGTATG ACTGATCAGG ATGACACCGA AAAAAGGGCA ATCATACAAA AAATAAAAAC CAATGTGAAC GAATTGTATA CCGGAACAAA AGATATCCTC TGGTCTTTAA ACCCAAAACA CGATACCTTA TGTGAATTGC TGACCCATAT CAGGGAATTT GGACAGGAGA TGTTTAACGG AACGCCCATA CTTTTTGAAG AAGAAACTTC CCTGAATGAC ACGGACAGCA GGCTTTCACT CGAAATGAGC AGGAATATCC TGATGATCTT TAAGGAGGCC ATACACAATG CCTTAAAACA CTCAAAAGCA GATCATGTTA AATTTACAGC AAAGATGGCC CATGATGTTT TAGACATCAG GCTTGATGAT AACGGGACTG GTTTCGATGT AGCATCTGCC GGAAACGGTC ATGGGATCAA CAATATGAAT GTCCGGGCCG CCCGGATCAA TGGAATTTTA AACATTATCT CCAATACTAA AGGAACAACA ATAGCGCTCT CTGTTAAATT TAAAACATCA AAAAATGCAG AATCAGGCAG AAGCAAGAGT AGTTATCATA GAAGATGA
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Protein sequence | MLFLLASGLQ AFSQRYNFEH YNIEDGLVQS QVTAITQDKQ RRLWIATLGG LSCFNGNQFI NFGKTDGLNS NFILSLAVND QNSLFIGSGR GLSAYNGFSF YHYKETNNWT DMLVAGTGNM VYGLSDRHLF KTNRSATERV NISRDTAEMV TTLTTDQGGK IWAAVYTHGI YSLEGNKWQA KITGAAVKNL VVTGLLIDKF VKDKIWLLTT TGIFLSEHGK LLSRYAGKIK KATAILQDEK GNIWLGTNKG AWYISTDHEI YFNAKNGFTD NVVKQIFRDA ENNIWFGTDG SGIYRFNSNG YVTFDESQGL QNNIVMSIVN GPKPDEIWLG TYDGLFSQQN NQIRRISIPS DNEDTKRINV LLKDSKNDIW VGTVGGGLWL YHKNRFKRID HESRGIACNA IMEDRDHNIW LSTNTGCFMV DNLSKKISRI SPRFGSSLLE IGKDSIITGT QNGAYLVNHK KEIKRLKFRL IEGSSILAML KNGPDVFFGT ADNGLIIWDT VTGKVKQLST KNGLFSDHIY SLLLDKRGTI WIGTGRGINR LNSKDHSLIK GNDGNALLVE CNQNAILEKD DKIWIGTTKG AIVHYNKISP SVAGTPYVFI NSAGVLSQNK KGDQNNLQIT YKERELNQEI TLPYDHNHLN INFTGIYLTN PKALMYTYRL IGLDTTYSKP AANSSINYTA LPPGKYTFQV KALTVSGIES GNTAAIQFQI TPPYYQTAIF KIFILLVILL LIILSVYVII NLNERQRRLR LKIKLEEQFK IRKQTAEDFH DDLGNKLTRI SVLSEVLTSM TDQDDTEKRA IIQKIKTNVN ELYTGTKDIL WSLNPKHDTL CELLTHIREF GQEMFNGTPI LFEEETSLND TDSRLSLEMS RNILMIFKEA IHNALKHSKA DHVKFTAKMA HDVLDIRLDD NGTGFDVASA GNGHGINNMN VRAARINGIL NIISNTKGTT IALSVKFKTS KNAESGRSKS SYHRR
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