| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1604 |
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| Symbol | |
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| ID | 8252706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1899723 |
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| End bp | 1901051 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644935258 |
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| Product | xylose isomerase |
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| Protein accession | YP_003091879 |
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| Protein GI | 255531507 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAC TTACTGCAGA CAACGAATAT TTCAAAGGGA TCGGACAGAT CAGCTTTGAA
GGACAGGAAA CAGACAACCC GCTGGCTTTC AGATGGTACA ATCCTGAACA GGTGGTTGCC
GGCAAAAAGA TGAAAGAGCA CCTGCGTTTT GCCGGTGCTT ACTGGCATTC TTTCTGCGGA
AATGGTACAG ATCCCTTTGG CGGTCCGACA CATATTTTTC CCTGGGACGC GAAAGCGGAT
GTACTGGATC GTGCAAAGGA CAAAATGGAT GCAGCCTTTG AATTTCTGAC CAAAATGAAC
CTGCCCTATT ACTGCTTTCA TGATGTGGAT GTGGTAGATT ATGGCAACGA CATCAAAGAA
AATGAAAGAC GGATGCAGAT CATGACCGAT TATGCAAAAG CCAAACAGGC AGAAACAGGT
GTAAAATTGC TTTGGGGTAC GGCTAATCTT TTCTCTCACC GCAGGTATAT GAACGGAGCG
GCTACCAATC CCGACTTTCA TGTGCTGAGC CATGGCGCAG CACAGGTAAA AGCAGCCCTT
GATGCCACCA TAGCCCTTAA TGGGGAAAAT TATGTATTCT GGGGTGGCCG CGAAGGTTAC
ATGAGCCTCC TGAACACCAA TATGAAACGC GAACAGGAAC ATCTGGCAAA ATTTCTGCAT
ACAGCCAAAG ATTATGCCCG TAAAAATGGT TTCAAAGGCA CCTTCTTTAT TGAGCCCAAA
CCTTGTGAAC CCACCAAGCA CCAGTACGAT TACGATGCAG CAACCGTACT TGGCTTTCTC
CGTCAGTACG ACCTGCTGGG TGATTTTAAA CTGAACCTGG AAGTTAACCA TGCTACGCTG
GCCGGACATA CCTTCCAGCA TGAGCTGCAG GTGGCTGCTG ATGCCGGAAT GCTGGGCTCT
ATTGATGCCA ACCGCGGCGA CGAACAAAAT GGCTGGGATA CAGACCAGTT TCCAAACAAC
ATCAATGAGG TTACAGAATC CATGCTGATC ATCCTGGAAG CAGGGGGCCT GCAAGGTGGG
GGTATAAATT TCGATGCCAA GATCCGCAGG AATTCAACGG ATCCGGCCGA CCTTTTCCAT
GCACATATTG GTGGAATGGA TATTTTCGCC CGGGCCCTGA TTACCGCCGA CCGCATCCTT
CAGCATTCTG AATACAAAAA AATAAGGGCA GAAAGATATG CGTCTTACGA CAGTGGAAAA
GGCAAAGCCT TTGAAGAAGG GAGCTTAAGC CTGGAAGACC TGCGCGATTA TGCAGTGGCA
CAGGGCGAAC CGCAAACCAT CAGCGGCAAA CAGGAATTCC TGGAAAACCT GATCAACAGG
TATATTTAA
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| Protein sequence | MTKLTADNEY FKGIGQISFE GQETDNPLAF RWYNPEQVVA GKKMKEHLRF AGAYWHSFCG
NGTDPFGGPT HIFPWDAKAD VLDRAKDKMD AAFEFLTKMN LPYYCFHDVD VVDYGNDIKE
NERRMQIMTD YAKAKQAETG VKLLWGTANL FSHRRYMNGA ATNPDFHVLS HGAAQVKAAL
DATIALNGEN YVFWGGREGY MSLLNTNMKR EQEHLAKFLH TAKDYARKNG FKGTFFIEPK
PCEPTKHQYD YDAATVLGFL RQYDLLGDFK LNLEVNHATL AGHTFQHELQ VAADAGMLGS
IDANRGDEQN GWDTDQFPNN INEVTESMLI ILEAGGLQGG GINFDAKIRR NSTDPADLFH
AHIGGMDIFA RALITADRIL QHSEYKKIRA ERYASYDSGK GKAFEEGSLS LEDLRDYAVA
QGEPQTISGK QEFLENLINR YI
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