| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1602 |
|---|
| Symbol | |
|---|
| ID | 8252704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1897759 |
|---|
| End bp | 1898427 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644935256 |
|---|
| Product | GntR domain protein |
|---|
| Protein accession | YP_003091877 |
|---|
| Protein GI | 255531505 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATTG AATATATCAA AAAGAAATCG CTGGCGGATG AAGTTGCGGC CAGACTTCAG
GAACAAATTA CACTGGGCAG GTATAAGGTA GATGAAAAAC TACCCATAGA ACCAGCGCTG
ATGAAGCATT TTGGAGTAGG CAGGTCTACG ATCAGGGAAG CGATAAAGAT CCTGGCAAAT
TCGGGCTTAC TGCGCGTACA GCAGGGTATA GGTACTTTTG TAGAGCAGGT TACCTGCAGT
AAGGAGCCGA TGGAACAAAG GCTGAAGCGT GCAAATGTGC AGGATCTGGA CGAAGTGCGG
CAGCTGTTGG AAATGAAAAT TGCCGAAAAA GCTGCCCTAA ACCGGACAGA TGCTGATATC
ATAGCCATCA GGGGCCATCT GGAAAACCGG AGAAAAGCAG CGGCCGAAGG TTTAAAAGAA
GCTTGCATAG ATGCTGATGT AGCCTTTCAT ATGGCCATAG CAGAGGCTTC AAAAAATGAG
ATCCTGGCCG ATCTCTACAA GTCCACTTCC GTACACCTTA AAAAATGGTT TCTTCAGATC
TATCCAGATA CCCGGGCATT TGAGGAAACG TATGTGATCC ACGAACAGCT GTTAAAAAGT
ATCATTGCCG GCGACGCCAA AAAGGCATGG ACAATTGCCG CAAAAATTAT CGGTCACGTA
TCCCAGTAA
|
|---|
| Protein sequence | MGIEYIKKKS LADEVAARLQ EQITLGRYKV DEKLPIEPAL MKHFGVGRST IREAIKILAN
SGLLRVQQGI GTFVEQVTCS KEPMEQRLKR ANVQDLDEVR QLLEMKIAEK AALNRTDADI
IAIRGHLENR RKAAAEGLKE ACIDADVAFH MAIAEASKNE ILADLYKSTS VHLKKWFLQI
YPDTRAFEET YVIHEQLLKS IIAGDAKKAW TIAAKIIGHV SQ
|
|---|
| |