Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1593 |
Symbol | |
ID | 8252695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1885051 |
End bp | 1886886 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644935247 |
Product | metallophosphoesterase |
Protein accession | YP_003091868 |
Protein GI | 255531496 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.245606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC TCCTTTCTTT TGCCATTCTA TTCAGCTGTT TTATCAACAG CAATGCCCAG ACCTTTAAAT ATGCCTTTGT AACTGATACC CATGTGGGTA CAGCTACCGG CGAAGAAGAC CTGAGAAGAA CCGTAAATGA CATCAATAAA CAAACAGATC TTGACTTTAT AGTGGTTACG GGCGATGTTA CAGAAATGGG CACCAAATTA GAACTTAAAC TGGCAAAATC TATTTTAAGC GAATTAAAAA AGCCTTATTA CGTTATACCC GGTAATCATG ATACGGGTTG GTCAGAATCG GGTGGTGTGG ATTTCATCAG GGAATTTGGC GACGATAAGT TTACATTTGA CCACAACGGT TATCGTTTTA TTGCCTGCGC TTCGGGGCCC TATGTAAGGA TGTCTGACGG CCATATCCCC AGGGATGCCG TAATCTGGCT GGATAAAGTG TTAAAAAATA CTTCTGCTAC CATGCCGGTT ATTTTCATCA ACCACTACCC TGTCGACAAT AGTCTGGATA ACTGGTACGA AGCAACCGAC AGGATAAAAA AATACAATAT ACAGTATGCC ATCTGCGGGC ATGGCCATTC CAATCAGGCG CTTAATTTTG AAGGTGTACC CGGTACCATG GGGCGCTCCA ATTTAAGGGC AAAAGATAGT CTTGGTGGTT ATAACATTGT AACCATGCGC AAAGATTCTG TCCTGTTCGC CGTTAAAAAA CCCGGTCTTA TGCTTGAACA TCCCTGGAGA AAAATTGCAC TGGGCAAATT CAGCGCAAGC AGTACCGGAA AGATAGAAAG GCCCTCGTAT GAAATCAATA AGACCTATCC GCAGGTCAAA AAAGTATGGA GCTACCATGC AGCAGCCAAT GTGGTATTGA CACCTGCAGC CAGCAATGAG CTGGTTATAT TTGGCAACAG CATAGGCGAG ATAGAGGCTT TATCAATTAA AGATGGCAGC AAAAAATGGG TTTATAAAAC AAAAGGTGCC ATTTATTCTT CGCCTGCCAT AGCAGACAAT TTGGTTGTCC TGGGTTCGGG CGATGGCAGC ATTTATGCGC TGCAGCTCAA TACAGGCAAA CTGCTTTGGA AATTCGATAC CAAAGCTGCC GTTCTGGGTT CTCCGGTGAT TGATAAAGGC CTGGTTTATA TTGGCGGGAG CGACAACCAC TTCAGGGCAA TTGAACTGAA AACGGGGAAA GAGCGCTGGG CCTTTAACCA GGTAGAGGGC ACTATTGTAG GCAAACCTTT GTTGTATGAA GGTAAAGTGA TCTTTGGTTC CTGGGGCCGT CACTTATATG CACTGGACCA ACATACAGGC AACCTGTTGT GGAAATGGAA CAATGGAAAT GCCAACCGCA TGTTCTCTCC GGCCATGTGC ACACCGGTAG CCCATAAGGG CATTGTTTAT TTTGCGGCAC CCGACAGGGT ACTTACTGCA CTTGATGCAA ACAGCGGAGC AACACTTTGG AGAAATAAAG AAGCTACTGT GAGAGAGTCT ATCGGCCTGT CGGAAGATGG ATCCCTGATT TTTGGCAAAA CCATGAACGA TGAGGTGGTG GCCTATAAAA CACAGGCTAC GGACCCGGGC ATATTGTGGA GATTAAACAT GGGCTTCGGT TATGAGCATG TACCTTCTAT GCTGATCGCA AAAGATGGAG AAGTGTTTTT CGGTACACGA AATGGCGTGG TATATGCTTT TGATCCGCTG GAGCGCAAAA CTATATGGGC ACATAAAATA GACAACTCTA TGATCAACAC CGTAAATGTA TTGCGTAAAA ATGCGGTTTT GGTGGCTACT ATGGACGGTG TGGTTAGTTT ACTGAATATT AAGTAA
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Protein sequence | MKLLLSFAIL FSCFINSNAQ TFKYAFVTDT HVGTATGEED LRRTVNDINK QTDLDFIVVT GDVTEMGTKL ELKLAKSILS ELKKPYYVIP GNHDTGWSES GGVDFIREFG DDKFTFDHNG YRFIACASGP YVRMSDGHIP RDAVIWLDKV LKNTSATMPV IFINHYPVDN SLDNWYEATD RIKKYNIQYA ICGHGHSNQA LNFEGVPGTM GRSNLRAKDS LGGYNIVTMR KDSVLFAVKK PGLMLEHPWR KIALGKFSAS STGKIERPSY EINKTYPQVK KVWSYHAAAN VVLTPAASNE LVIFGNSIGE IEALSIKDGS KKWVYKTKGA IYSSPAIADN LVVLGSGDGS IYALQLNTGK LLWKFDTKAA VLGSPVIDKG LVYIGGSDNH FRAIELKTGK ERWAFNQVEG TIVGKPLLYE GKVIFGSWGR HLYALDQHTG NLLWKWNNGN ANRMFSPAMC TPVAHKGIVY FAAPDRVLTA LDANSGATLW RNKEATVRES IGLSEDGSLI FGKTMNDEVV AYKTQATDPG ILWRLNMGFG YEHVPSMLIA KDGEVFFGTR NGVVYAFDPL ERKTIWAHKI DNSMINTVNV LRKNAVLVAT MDGVVSLLNI K
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