| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1589 |
|---|
| Symbol | |
|---|
| ID | 8252691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1878569 |
|---|
| End bp | 1879813 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644935243 |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | YP_003091864 |
|---|
| Protein GI | 255531492 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.43128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.157627 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGATT TTAACCGTTT TACACTGGCC AACGGCCTTC GTGTACTGGT ACATGAAGAT
GATACAACGC CCATGGCGGT GTTAAACATT TTATATGATG TAGGCGCCAG GGACGAAGAA
GCCGGCAGAA CAGGCTTTGC GCATTTGTTT GAACACCTCA TGTTCGGGGG CTCGGTGAAT
ATACCAAGTT ACGATGAACC CCTACAGCGT GTAGGGGGCG AAAACAATGC CTTCACCAGC
AACGACATCA CCAATTATTA CATTACGCTG CCGGCTGTAA ACCTGGAAAC GGCCTTCTGG
CTGGAAAGCG ACCGCATGCT AAGCCTGGCT TTTTCTGAAA AAAGTCTGGA AACCCAGCGC
AATGTAGTTT GTGAGGAGTT TAAACAACGT TACCTGAACC AGCCCTATGG CGATGTATGG
TTAAAATTGA GGCCGCTGGC CTACACTACA CACCCTTATC GCTGGGCAAC CATCGGGCAG
GACCTGGCGC AAATTGAAAA CGCTAAAATG GAAGATGTGA AAGCATTTTT CAAAAAACAT
TATAATCCCC AGAATGCCAT TATGGTTGTA GGTGGAAATG TAAAAACTGA AGCGGTAAAA
GCCCTGGCCG AAAAGTGGTT TGCTGCTATC CCGGCAGGAG AAAAATACCT GAGAAACCTG
CCTGCAGAAC CCGCCCAGAC TGAAGAAAGA AAAGAAAGGC TTACTGCCGA TGTACCTTTA
AATGCCATTT ATATGGCCTT TAAAATGCCT GCCAGAAAAG ACCGTGACTA CCAGGTATAT
GACCTCATGT CAGACGTGCT CTCACAAGGG CAGTCGTCCA GGTTATACAA CAGCCTGCTC
AAAGAGCAGC AGCTGTTCAG CGATATCCAC GCTTACATTA CCAGCAGCAT AGACGAGGGT
TTGTTTGTCA TTGAAGGTAA GCTGGTTGAA GGGGTCAGCA TGGATACTGC AGAAAACGCC
ATCTGGAAGG AACTGGACAA ACTTACCGAA GAACCGGTTA CCGACGAAGA GATCACTAAA
GTGAAAAACA AGTCAGAATC TATTATGGTA TTTGCCGAGA TGAACCTGCT GGATAAGGCC
ATGAACCTCG CTTATTATGA GCTGCTCGGT GATGCAGCCG GCCTGAATAC AGAGATCGAC
AAATATCTGG CAGTTAGTCC CCAGCGTATC CTGCAGGCTG CCAAAAAAAC CTTTGTGAAA
ACACAATGTT CAACTTTATA CTATTTAACT GTCAAAGATG CTTAA
|
|---|
| Protein sequence | MVDFNRFTLA NGLRVLVHED DTTPMAVLNI LYDVGARDEE AGRTGFAHLF EHLMFGGSVN
IPSYDEPLQR VGGENNAFTS NDITNYYITL PAVNLETAFW LESDRMLSLA FSEKSLETQR
NVVCEEFKQR YLNQPYGDVW LKLRPLAYTT HPYRWATIGQ DLAQIENAKM EDVKAFFKKH
YNPQNAIMVV GGNVKTEAVK ALAEKWFAAI PAGEKYLRNL PAEPAQTEER KERLTADVPL
NAIYMAFKMP ARKDRDYQVY DLMSDVLSQG QSSRLYNSLL KEQQLFSDIH AYITSSIDEG
LFVIEGKLVE GVSMDTAENA IWKELDKLTE EPVTDEEITK VKNKSESIMV FAEMNLLDKA
MNLAYYELLG DAAGLNTEID KYLAVSPQRI LQAAKKTFVK TQCSTLYYLT VKDA
|
|---|
| |