Gene Phep_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1587 
Symbol 
ID8252689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1876418 
End bp1877272 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content46% 
IMG OID644935241 
Producthypothetical protein 
Protein accessionYP_003091862 
Protein GI255531490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.260029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0327578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG TAAATATATT AGAAGAAATT GAAAAGGTTG ACGGAGAGAT CTATGAGCGT 
ATAAACCCTA GAAGGGCCGC CATGAAAGAT TTTTTCAATA TGGGTAAAAA AATCTCATTG
GCTGCCTTGC CTTTGGCAAT GGGCTCCATG TTCCAGAAAG CCTATGGCCA AACTACGCCT
GCTGCGGTAA CAGATGTGCT AAACTTTGCT TTGGCACTGG AATACCTGGA ATATCACTTT
TATAACCATG CATTGGTGGC AGCACCAAAC CTGGCCATTC CGGCAGGAGC GCCTAAAACG
GCCATCACTA CCATCCGCGA TCATGAGTTG GCGCATGTTA ATTTATTAAA AGGGGCGCTG
GGTAGTGCTG CACGGGCAGA AATTACTTAT GCCATGACCG ATTTTACTGC GGGCGGAACC
TTTCCCCTGG TTTATGACGA TTATGTAACT TTCTTAAAAG TAGCATTGGG ATTTGAAGAT
ACAGGGGTAA GGGCCTATAA AGGACAGGCT CCGGCATTGA AGGGGAATGC GGTGCTGACT
ACTGCATTGC AGATCCATTC TGTAGAGGCC CGTCATGCTT CACATATCCG TCAGATGCTT
GCTGCCAATG GTGCAACGGG TTTAAAACCA TGGATCAGCT TAGGCCCGGG TGGTATCGCC
AATGATACCG GTGTTTCGGC AGTTGATGCG GTTTATGTAC GTGAAAATAC AGATGTACAG
GCAGGCATCA CCATTACCGG TATTGCAAAT GGGGTAACTA AAGCAGCTGC GGTTGAAAGT
TTTGATGAAT TCTTAACCAA AACTGAAGTG GTAGCCATTG CCAACCTGTT CCTGAGAACA
GGATTTAAAT TATAA
 
Protein sequence
MNIVNILEEI EKVDGEIYER INPRRAAMKD FFNMGKKISL AALPLAMGSM FQKAYGQTTP 
AAVTDVLNFA LALEYLEYHF YNHALVAAPN LAIPAGAPKT AITTIRDHEL AHVNLLKGAL
GSAARAEITY AMTDFTAGGT FPLVYDDYVT FLKVALGFED TGVRAYKGQA PALKGNAVLT
TALQIHSVEA RHASHIRQML AANGATGLKP WISLGPGGIA NDTGVSAVDA VYVRENTDVQ
AGITITGIAN GVTKAAAVES FDEFLTKTEV VAIANLFLRT GFKL