| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1586 |
|---|
| Symbol | |
|---|
| ID | 8252688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1875678 |
|---|
| End bp | 1876400 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644935240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003091861 |
|---|
| Protein GI | 255531489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.200822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0181196 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT TAGAACAAGA AAAGCTGGAT ATGGTTCTCG AGGAGAGCAG TATACTCACA
GCCAGCCTGC AACGCCGTTC CTTTTTGAAA TATGCTGGCG CGGGTGCTGC CGGAATTGCT
TTAATCGCTG CAGGCTGTAA AAAAGACCGT GGCGGAAACC CAATGACAGG TACTATACTG
GATTTTAAAG ATGATTTTGG CGTATTGAAT TATGCTTATG CTTTAGAACA ACTGGAAGCT
GCATTTTACG TGCAGGTGGC CTCCAATCCA CCGTCTACAT TTAGCGCTAC AGAAAAAGCT
TATTTCCAGG ACATCCAGTT TCATGAAATT GCCCATAGGG AATTCTTTAA AAAAGCATTG
GGCCCGGCTG CTATAGGTAG CCTGGAGGTC GATTTTTCAA GTATAAACTT TACTGACCGT
GCAAGTGTGC TGGGTGCAGC AAAGGCTTTT GAAGATCTGG GAGTTGCAGC CTATAACGGT
GCTGGGGTAA GGATTAAAAC TGATACTTAC CTGGTTTTAG CCGGACAGAT CGTTTCCGTA
GAGGCCCGTC ATGCCGCTTA TGTCAGGGAT TTAATTTCCA ACGGGAGCTT TGCAGACTTA
AATGACCTTA CTGCCCTGAA TTCTAACCCG GCAGGTGGCC TGGATGGTGC ATTAACACCA
GATAAAGTGT TGGGTATTGC CGGCAAGTAT ATCAAAACTA AAATTAATGT AATCAATCTT
TAA
|
|---|
| Protein sequence | MKNLEQEKLD MVLEESSILT ASLQRRSFLK YAGAGAAGIA LIAAGCKKDR GGNPMTGTIL
DFKDDFGVLN YAYALEQLEA AFYVQVASNP PSTFSATEKA YFQDIQFHEI AHREFFKKAL
GPAAIGSLEV DFSSINFTDR ASVLGAAKAF EDLGVAAYNG AGVRIKTDTY LVLAGQIVSV
EARHAAYVRD LISNGSFADL NDLTALNSNP AGGLDGALTP DKVLGIAGKY IKTKINVINL
|
|---|
| |