Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1583 |
Symbol | |
ID | 8252685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1872305 |
End bp | 1873579 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644935237 |
Product | peptidase M28 |
Protein accession | YP_003091858 |
Protein GI | 255531486 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0469907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA GAATTCTAGT TTATTGCGTT ATATTTTTTT GCTTTTTACA AGCACAAGCA CAAGAGGAGT ACGCCCGTTA TGTTGTCAGG GAATTAACGT CTAAGCCATA TCATGGAAGG GGATATGTTT TTGATGGTGA TCGTAAAGCT GCCAATTTTA TAAGAAAAGA ATTTAAGAAA TATCAAATTC AACCGCTCGG GGATGATTAT TTTCAATATT ACAATTTATC GGCGAATACA TTTCCTACCG AACCAAAAGT AAGCATCAAT GGTAAGGAAT ATCATCCGGC AATAAATTAT TTAGTAGATG CAGCATCCCC GGCGATAGAG GGAACATTCG ATATAGAAGT CTTGGAATTG AAGTCATCGG ATAAACAAGC TGTTGAAGCC ATACTTAACA ATTCGAATTA TGAAAATAAA TTTTTATATA TCGATGAAGA TTTGGCTTTG AAGCATATGA AAGCCCCGCA GCTAAAAGAG GTTACAGATC AATTGAAAAA AGCAGGATTT CATAAAGGAC TTATTTTAAA TTCGCAGCAA AAATTGAAAT GGAGATCATT AACTTATCAA AATGAAAAGG CAAGTATCAA TACGCGGTCT TTATGGTTGG ATCCAAAAGT TAAAAATGTT GCTCATGTTA AAATTGCCCC TAAATTAATT CCGCAATACC GGACCCAAAA TGTATGCGGC TTTATCAAAG GGACAAGTTC TTCTGATTCT ACGATTGTTG TTACTGCTCA TTATGATCAT ATTGGTGCGA TGGGTAAAAA AGTATATTTT CCAGGAGCAA ATGACAATGC TAGTGGGACA GCTATGTTGA TGTATTTAGC AAAGTATTAT GCTACAAATG CGCCTAAATA TAATGTTGTA TTCTTAGCTT TTTCAGGAGA AGAAATTGGT TTATTGGGTT CTAAGCATTA TGTGAGTAAC CCTCTACTGG ATTTAAGTAA GATCAAATTT CTGTTGAATT TAGATATGGC TGGAACTGGT GATGAAGGAG TTCAGGTGGT CAATGGAACA GAATTTAAAC GGGAGTTTGA TACATTGGTT AAGATGAATA AAGATAATGA GCTATTGCCT CAGGTATTGG TGAGGGGACC TATGAATCGT TCTGATCATT ATCCGTTTTT TGAAAAATCA GTCCCTTGTT TCTTTTTTTA TACACTTGGG GGCATTGATG CTTATCATGA TGTTTACGAC CGGTATGAAA CACTGCCTTT TACAAGGTTT AATAGCTATG CCAGGTTGCT GATCCGATAT ATGGATCATT TTTAA
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Protein sequence | MKIRILVYCV IFFCFLQAQA QEEYARYVVR ELTSKPYHGR GYVFDGDRKA ANFIRKEFKK YQIQPLGDDY FQYYNLSANT FPTEPKVSIN GKEYHPAINY LVDAASPAIE GTFDIEVLEL KSSDKQAVEA ILNNSNYENK FLYIDEDLAL KHMKAPQLKE VTDQLKKAGF HKGLILNSQQ KLKWRSLTYQ NEKASINTRS LWLDPKVKNV AHVKIAPKLI PQYRTQNVCG FIKGTSSSDS TIVVTAHYDH IGAMGKKVYF PGANDNASGT AMLMYLAKYY ATNAPKYNVV FLAFSGEEIG LLGSKHYVSN PLLDLSKIKF LLNLDMAGTG DEGVQVVNGT EFKREFDTLV KMNKDNELLP QVLVRGPMNR SDHYPFFEKS VPCFFFYTLG GIDAYHDVYD RYETLPFTRF NSYARLLIRY MDHF
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