Gene Phep_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1583 
Symbol 
ID8252685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1872305 
End bp1873579 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content35% 
IMG OID644935237 
Productpeptidase M28 
Protein accessionYP_003091858 
Protein GI255531486 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0469907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA GAATTCTAGT TTATTGCGTT ATATTTTTTT GCTTTTTACA AGCACAAGCA 
CAAGAGGAGT ACGCCCGTTA TGTTGTCAGG GAATTAACGT CTAAGCCATA TCATGGAAGG
GGATATGTTT TTGATGGTGA TCGTAAAGCT GCCAATTTTA TAAGAAAAGA ATTTAAGAAA
TATCAAATTC AACCGCTCGG GGATGATTAT TTTCAATATT ACAATTTATC GGCGAATACA
TTTCCTACCG AACCAAAAGT AAGCATCAAT GGTAAGGAAT ATCATCCGGC AATAAATTAT
TTAGTAGATG CAGCATCCCC GGCGATAGAG GGAACATTCG ATATAGAAGT CTTGGAATTG
AAGTCATCGG ATAAACAAGC TGTTGAAGCC ATACTTAACA ATTCGAATTA TGAAAATAAA
TTTTTATATA TCGATGAAGA TTTGGCTTTG AAGCATATGA AAGCCCCGCA GCTAAAAGAG
GTTACAGATC AATTGAAAAA AGCAGGATTT CATAAAGGAC TTATTTTAAA TTCGCAGCAA
AAATTGAAAT GGAGATCATT AACTTATCAA AATGAAAAGG CAAGTATCAA TACGCGGTCT
TTATGGTTGG ATCCAAAAGT TAAAAATGTT GCTCATGTTA AAATTGCCCC TAAATTAATT
CCGCAATACC GGACCCAAAA TGTATGCGGC TTTATCAAAG GGACAAGTTC TTCTGATTCT
ACGATTGTTG TTACTGCTCA TTATGATCAT ATTGGTGCGA TGGGTAAAAA AGTATATTTT
CCAGGAGCAA ATGACAATGC TAGTGGGACA GCTATGTTGA TGTATTTAGC AAAGTATTAT
GCTACAAATG CGCCTAAATA TAATGTTGTA TTCTTAGCTT TTTCAGGAGA AGAAATTGGT
TTATTGGGTT CTAAGCATTA TGTGAGTAAC CCTCTACTGG ATTTAAGTAA GATCAAATTT
CTGTTGAATT TAGATATGGC TGGAACTGGT GATGAAGGAG TTCAGGTGGT CAATGGAACA
GAATTTAAAC GGGAGTTTGA TACATTGGTT AAGATGAATA AAGATAATGA GCTATTGCCT
CAGGTATTGG TGAGGGGACC TATGAATCGT TCTGATCATT ATCCGTTTTT TGAAAAATCA
GTCCCTTGTT TCTTTTTTTA TACACTTGGG GGCATTGATG CTTATCATGA TGTTTACGAC
CGGTATGAAA CACTGCCTTT TACAAGGTTT AATAGCTATG CCAGGTTGCT GATCCGATAT
ATGGATCATT TTTAA
 
Protein sequence
MKIRILVYCV IFFCFLQAQA QEEYARYVVR ELTSKPYHGR GYVFDGDRKA ANFIRKEFKK 
YQIQPLGDDY FQYYNLSANT FPTEPKVSIN GKEYHPAINY LVDAASPAIE GTFDIEVLEL
KSSDKQAVEA ILNNSNYENK FLYIDEDLAL KHMKAPQLKE VTDQLKKAGF HKGLILNSQQ
KLKWRSLTYQ NEKASINTRS LWLDPKVKNV AHVKIAPKLI PQYRTQNVCG FIKGTSSSDS
TIVVTAHYDH IGAMGKKVYF PGANDNASGT AMLMYLAKYY ATNAPKYNVV FLAFSGEEIG
LLGSKHYVSN PLLDLSKIKF LLNLDMAGTG DEGVQVVNGT EFKREFDTLV KMNKDNELLP
QVLVRGPMNR SDHYPFFEKS VPCFFFYTLG GIDAYHDVYD RYETLPFTRF NSYARLLIRY
MDHF