Gene Phep_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1571 
Symbol 
ID8252673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1854833 
End bp1855162 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content35% 
IMG OID644935225 
Producthelix-turn-helix domain protein 
Protein accessionYP_003091846 
Protein GI255531474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.176478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA TTGGAAAAAA CATTAGACAA TTGCGCCAGA AAAATGGTTG GAGCCAGGGG 
GAAGTGGCTA AGCGTCTAAA TATTTCAATC CCGGCGTTCT CAAAAATCGA AACTGGTATT
ACTGATATTA ACATTTCAAG ACTGGCACAA ATTGCTAATC TTTTTGAGGT TTCAACAATG
GACATTATAT CCAAAGAAGG TGAAAACCCA CAGTCGCTTA ATTTTGAGGA AATTAATGGC
TTAAAAGAAA AACTTGCACA AAGAGAAGAA GAGATCATTA AGCTTCAAAA GAAAGTGATC
GATCTTTATG AAGAAATAAG AGAAAAATAG
 
Protein sequence
MNIIGKNIRQ LRQKNGWSQG EVAKRLNISI PAFSKIETGI TDINISRLAQ IANLFEVSTM 
DIISKEGENP QSLNFEEING LKEKLAQREE EIIKLQKKVI DLYEEIREK