| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1564 |
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| Symbol | |
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| ID | 8252666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1849499 |
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| End bp | 1849903 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935218 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_003091839 |
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| Protein GI | 255531467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.395959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAA TCGAACATAT AGGCATTGCA GTTAAAAATA TGGACATTTC CTGTAGCCTT
TACGAACAAT TGTTGGGTGC GGCCTGCTAT AAAAAGGAAC TGGTAGCCTC AGAAGGGGTA
AATACTGCCT TTTTTAAAAC CGGCCAGAAT AAGATAGAAC TGCTCAGTGC AACTGTTGCA
GATAGTCCCA TTGCTAAATT CCTTGAAAGA AAGGGAGAGG GGATCCACCA CATCGCATTT
GATGTGGAAG ATATTGTGGT CGAGATGGAC AGGTTAAAGG CAGCCGGATT TGTACTGTTA
AATGAACAGC CAAAAAGAGG GGCCGACAAT AAGCTGGTTT GTTTTGTGCA TCCAAAAGGC
ACAAATGGGG TGCTTGTAGA ACTGTGTCAG GAAATTAAAG CTTAA
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| Protein sequence | MNKIEHIGIA VKNMDISCSL YEQLLGAACY KKELVASEGV NTAFFKTGQN KIELLSATVA
DSPIAKFLER KGEGIHHIAF DVEDIVVEMD RLKAAGFVLL NEQPKRGADN KLVCFVHPKG
TNGVLVELCQ EIKA
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