| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1553 |
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| Symbol | |
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| ID | 8252655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1838582 |
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| End bp | 1840465 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935207 |
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| Product | Mn2+/Fe2+ transporter, NRAMP family |
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| Protein accession | YP_003091828 |
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| Protein GI | 255531456 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.656007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TTAAGCACAC CGAACACAGA GATCCCCAAT CCTTAAGTGA AGTACATCAA
AGTGTAGATA CCAGCAAACG CACTGGATGG AAGCGTATAT TGTCTTTTAT TGGCCCAGCC
TACCTGGTTA GTGTGGGTTA TATGGATCCG GGCAACTGGG CAACAGACCT TGCAGGCGGC
AGTAAATTTG GTTACCAGCT TATCTGGGTG CTGCTCATGT CTAACCTTAT TGCTTTATTG
CTGCAATCGC TCAGTGCCCG TCTGGGTATT GTAAGAGGTC TTGATCTTGC CCAGGCTTCC
AGAAATGCAT ATCCAAAATG GGTTAACATT CCTTTGTTTG GTTTAGCCCA AACAGCTATA
GTAGCCTGCG ACCTGGCCGA AATTATAGGG ATGGCCATTG GCTTAAACCT ATTATTTGGC
CTGCCCCTCA TCTGGGGCAT CAGCATCACC ATCTTCGATA CCGTGCTGCT CCTCTTTCTC
CTTAACAAGG GCATGCGAAA AATGGAAGCC TTCATTGTTT CTATGGTATT CATTGTTGGT
GTTTCCTTTT TAATTGAAAT GTTCATTGTA GAGCCTTCAA TAATAGAAAT AGCGAAAGGT
TTTGAACCCT CTATACTAGG TGGGGAAGCT TTATATATTG CCATAGGTAT TATTGGTGCC
ACTGTAATGC CTCATAACCT GTACCTGCAC TCTTCGCTGG TACAGACCCG CAAATTCCAA
AGAGATGAAA AGGGCATCCA AGAAGCCATA AAATTTAATT TCATAGATAC TGCCGTAGCT
TTAAACCTGG CATTTTTCGT CAACGCCGCT ATCCTTATTC TTGCAGCTGC AGCTTTTTAC
AAAAACGGGC TGCATGAAGT GGCCGAAATA CAGGATGCCT ACAAACTGCT TCAAAATATA
TTTGGCAATG TGGCCCCTGC CCTTTTTGCT ATTGCGCTGA TTGCTGCCGG ACAGAGCTCA
ACAGTAACCG GAACACTAGC CGGACAGATT GTGATGGAGG GGCATCTTAA ACTCCGTATA
CAGCCCTGGT TACGTCGCTT AATTACACGT TTGCTGGCTA TTATCCCTGC TTTTTTTACT
ATACTCTGGT ATGGAGATGA TGCATTGGGC GGCTTACTGA TCCTGAGCCA GGTAGTATTG
AGCCTGCAGC TCGGCTTCGC TGTAATCCCT TTAATTCACC TTACTTCTGA TAAAAAAACA
ATGAAAGGCT TTGCCATAAA GTTATGGGTA AAAATACTGG CCTGGACCAG CTCGCTTATC
ATTGTAAGCT TAAATGTTAA ACTCGTTATA GAAGAAATAA AAACATGGGG TGCAAGTGGC
GAATGGTACA TATATGTACT GGTAGTTCCT GCCAGCCTGT TAATTGGCCT GCTGTTGCTC
TATGTTTTTA TATATCCTAT CCTGAGCCGC ATCCGGCGGG AAAACAACAA TGTTCCTCAT
GGCCACGCCC TTAACATTGA ACCGGTAGAA AAGATTGATT ACAGGCGGAT AGGGATTACG
GTTGATTTTT CTAAGAATGA CCGCAACACC ATTCGCCATG CGCTAATTCA GGGTGGTAAA
CAGGCCCAAT ATTACCTGAT CCATGTAGTT GAAACTGCTG CAGCAAGGTA TTACGGTGAT
ACGGCACTCG ATTATGAGAC CCAGAGTGAT ACCGAAAACC TGCAAAAATA CTGCAGTAAC
CTGGCCGAAC TGGGCTATCA GGCCAGTCCG CATATAGGCT ATGGCGGCAC CGTAAAAGCC
ATCGTCAGGA TCAGTAATGA AAACAAGCTT GAACTGCTGG TAATGGGGGC ACACGGACAT
AAGGGATTAA AGGACCTCAT ATTGGGAACA ACTGTCAATT CTGTTCGCCA TAAAGTATCC
ATACCTGTGC TCATTGTAAG ATAA
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| Protein sequence | MKNLKHTEHR DPQSLSEVHQ SVDTSKRTGW KRILSFIGPA YLVSVGYMDP GNWATDLAGG
SKFGYQLIWV LLMSNLIALL LQSLSARLGI VRGLDLAQAS RNAYPKWVNI PLFGLAQTAI
VACDLAEIIG MAIGLNLLFG LPLIWGISIT IFDTVLLLFL LNKGMRKMEA FIVSMVFIVG
VSFLIEMFIV EPSIIEIAKG FEPSILGGEA LYIAIGIIGA TVMPHNLYLH SSLVQTRKFQ
RDEKGIQEAI KFNFIDTAVA LNLAFFVNAA ILILAAAAFY KNGLHEVAEI QDAYKLLQNI
FGNVAPALFA IALIAAGQSS TVTGTLAGQI VMEGHLKLRI QPWLRRLITR LLAIIPAFFT
ILWYGDDALG GLLILSQVVL SLQLGFAVIP LIHLTSDKKT MKGFAIKLWV KILAWTSSLI
IVSLNVKLVI EEIKTWGASG EWYIYVLVVP ASLLIGLLLL YVFIYPILSR IRRENNNVPH
GHALNIEPVE KIDYRRIGIT VDFSKNDRNT IRHALIQGGK QAQYYLIHVV ETAAARYYGD
TALDYETQSD TENLQKYCSN LAELGYQASP HIGYGGTVKA IVRISNENKL ELLVMGAHGH
KGLKDLILGT TVNSVRHKVS IPVLIVR
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