Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1546 |
Symbol | |
ID | 8252648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1830651 |
End bp | 1831343 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644935200 |
Product | peptidase M22 glycoprotease |
Protein accession | YP_003091821 |
Protein GI | 255531449 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.311826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATGG CTACTATACT TCAAATTGAA ACCGCTACAC AAGCCTGTTC TGTTGCTATT TCCAGAAATG GGGAAACGAT TGCTTTAAAA GAAGAATTGG CAAATAACAT TCATGCAGGT AGTTTAACCT TGTTTATTGA AACGGCAATG GAAACTGCGG GATTACACTT TAACGATCTG GATGCTGTAG CGGTAAGCAA GGGTCCTGGC TCGTATACAG GCCTTAGAAT AGGAGTTTCA ACAGCCAAAG GTTTGTGTTT TGCACTGGAT AAGCCACTAA TTGCTATTGA TACCCTGCAG ACGATGGCAG CAGGATTTTT ACTGGAACAG GCCGGTTATG AAGGCTTGAT CTGTACCATG ATAGATGCCC GCAGAATGGA GGTTTTTACG GCTGTATTTG ATGCTGATTT AAATTATCTG GTGCCCACAG TTGCAAAAAT TATAGATGAA CAGAGTTTTG CCAGGGAACT GACGCTGGAA AAAGTTACTT TCATCGGTGA TGGTGCTATG AAATGTGCTG CGGTATTGCA ACAGGACAAT GCTACTTTCA GTGGTCGAAA TTTTAATTCA GCTACGAATA TGAGCCGGCT GGCTAATGAG GCTTATTTAA AAGGGCAATT TGAGGATGTG GCTTATTTTG AACCTTTTTA TCTGAAAGAT TTTGTGCTGA CAACCCCAAA GAAAAAGGTT TAA
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Protein sequence | MSMATILQIE TATQACSVAI SRNGETIALK EELANNIHAG SLTLFIETAM ETAGLHFNDL DAVAVSKGPG SYTGLRIGVS TAKGLCFALD KPLIAIDTLQ TMAAGFLLEQ AGYEGLICTM IDARRMEVFT AVFDADLNYL VPTVAKIIDE QSFARELTLE KVTFIGDGAM KCAAVLQQDN ATFSGRNFNS ATNMSRLANE AYLKGQFEDV AYFEPFYLKD FVLTTPKKKV
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