Gene Phep_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1539 
Symbol 
ID8252641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1826738 
End bp1827523 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content41% 
IMG OID644935193 
Producthypothetical protein 
Protein accessionYP_003091814 
Protein GI255531442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.312846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA TTAGGGATAA TAATTCGAGC AGGATATGTG GTGGTTTGAT CATCATAGGT 
GTAGGACTGG TGTTTCTGTT AAGAAATTTT GGGGTTTATA TTCCGGAATG GGTCATCAGC
TGGCCTATAT TATTGATCAT TGTTGGCTTT TTGATTGGTT ATAAGCGAAA TTTTAATGGT
CCGGGATGGA TAATTTTGAT ACTTGTGGGC GTTTTTTTTA CTGCCAGGGC AATTACGGGC
TTCGACATTT CGAAGTACTA TTTTGCGCTG ATATTCATTG TTGTAGGTCT GATGCTGATT
TTTAAACCGA AAAGATCGGC GATTGGCCGA GATAGGCGCT GTAAGGCCAG GTGGAAAGGC
AGGATGAAAA GGAAATATGC TGAAATGGGC GACCTGAACA TACCCGGAGA TGAGGAAGAG
TGGAATAAAT ATGCCAGTGC AGATAAAAAT GACATTATAG ATTCCGTTAA TTTTTTTGGT
GGCAGCCACC AAAAAATCTA TTCGCAAAAT TTTAAGGGTG GAGATGTGAT TGCTGTTTTT
GGCGGCGCCG ATATCAACTT AACACAGGCC GACTTTGAAG GGGTGATCAA GTTGGATGTG
GTAGCCATTT TTGGGGGAGT GAAGATCATT ATTCCTTCCG GCTGGGAAGT AAAATCGGAA
GTAACAGCCA TTTTTGGTGG TATAGATGAT AAAAGGACAC TTGGTGTGGC AGCTGTTGAG
CCCCGCAAAG TATTAATTAT TGAAGGGGTA GCCATGTTTG GAGGGGTTGA TATCAGAAAC
TTTTAA
 
Protein sequence
MEKIRDNNSS RICGGLIIIG VGLVFLLRNF GVYIPEWVIS WPILLIIVGF LIGYKRNFNG 
PGWIILILVG VFFTARAITG FDISKYYFAL IFIVVGLMLI FKPKRSAIGR DRRCKARWKG
RMKRKYAEMG DLNIPGDEEE WNKYASADKN DIIDSVNFFG GSHQKIYSQN FKGGDVIAVF
GGADINLTQA DFEGVIKLDV VAIFGGVKII IPSGWEVKSE VTAIFGGIDD KRTLGVAAVE
PRKVLIIEGV AMFGGVDIRN F