| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1530 |
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| Symbol | |
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| ID | 8252632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1815114 |
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| End bp | 1818602 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935184 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003091805 |
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| Protein GI | 255531433 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.975674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAT GGGTTTTTAT GCTATGGGCG CTCTCGTGTT TCCCATTTAT TAATGCGGAG
GCCCAGAATA TTTCAAATGA AGGCAAAGAT TTCTGGGCTG TGTTTCCTAC GCATGATCCT
TCCAGAGGTC AGGGTGGCAA TTCTAACCTC GCAAATGTTC GCATTTATAT TACAGCTAAG
GTTGCATCTG AAGTAACGGT TACCTGCGGA ACTTTTAGTA CAGGTACTAT ACCCATTCCT
ATAAATACAG CAGTTCCGGT TGATATCCCC AGAGTAAGTG CCTATGTTGC TCAAAATGAA
GCTAATGGGG TTCTGGTTAA TAAGGGGATT CATGTTGTGG TTACACCAGG CCATGAAAAA
GTTGCTGTAT TCGAACACAT CTATGCCGGC GCGCGATCTG CTGCTTCACT TATCCTTCCG
AATGAAGCGC TTGGCAGGGA ATATTATTCC ATGAACTATA CACAGGATTT AAATAACAAC
GAGGTCAGTA AAAATTTCCT GGTGCTGGTG GCTGCAGATC CCAATACCAC GCTTATTGTG
CATAAAAAAG ATGGCACAAC ATTTAAAGTA AACTTTGTAA ATGCAGGCGA CGTATACGAA
TACTTGCCCA ATACTCAGGA AGACCTGACC GGTGTTTATG TAGAAATAGA TCCCGCTTCA
CCGGATAACT GCAACAAGCG TTTTGCAGCT TATTCAGGCA GTACATCTTT AACCATAGGA
TGTAACGGCT CCCGGGATCC GTTGTTCCAG CAATTGTATC CCATTGGCAG CTGGGGCAAA
AATTACGGTG TCGTCCCATT TATTGACCGG CGGTACATTG TCCGGATACT TGCACAGCAG
GATAATACTC ATTTTCAGTT TGAAGGACAA TCCATTACCC TAAACAAAGG ACAATTTTAT
ACCAGCCCTG AGCTGGTCAA TGCCTCATTT ATATCGGCCG ATAAAAATAT AAGTGTGGCT
CAGTATTCGC TTACACAGGC TTGTTCTTCC GTTAATGGTG ATGAACTGAT CGGTGATCCC
GAAATGGTAC TCCTTAATCC TGTCGAATTT AATGTAAAGT CTACCACCTT GTTTTCTTCC
GATAAAGAAA ATATAGTGAA CAGGTACATC AATGTATGCA TTAAAGCATC AGCTGCCTCA
ACCTTTCGTA TCAACGGCCA GCCTGTAAAT ACGGTTTGGA CAGCTATACC ATCAAATCCG
GCATATGCTT ATACACAGAT TGAAATTACT GATATCAGTT CCTATCTTAC TGCCAATGAA
GGTTTTAATG CCGTTGCATA TGGGTTTGGC GCCCATGAAT CCTACGCCTA TTCTGCAGGT
ACAAATCTGG CAGCCAATAC CTATTTCCTG GTAACCAACA AAATTACCCA TAAGGATGCA
CAGAACGCAT GTATAGGACA GGAATCTGAC TTTAAGATCA TCCTGCCTTA CCTCGTTTCC
AGGATCACCT GGAAACTGGA TGATGGAGCA GAGGAACAAG GCCCCTTGGA TCCGCGAATA
ATTCCGGCAT CAGACGGTAC ATTGTCCTAT GAATATATTT ATGCCAGGGG CATAGCTTTT
ACTGAGTTAA AACCACATCA GGTTACTATA AAAATTGAAT TGCTTAATGA TGGGACCGGG
TGTCTAAGTG AAGGTGCAGA ATTTATTTAT CCTTTTGATG TTTATCCGCT GCCTACGCCT
GATTTTGAAG TAGCTGCCGA CAACTGTGCC GATACAGAAA TTCAATTTAC TGATCACAGT
ACATCAAATT TAACAGGCAG GCCTTTAAAT AAATGGCTAT GGGATTTTGG TGATGGAGCA
ACTTCTGCTG AACAGAACCC CCAACACATC TATGCCTTAT CAGGTTCCTT TGATGTAAAA
TTGTCTGCGG GTTTGGACGA AGGTTGTATG TCTGATGTTA AAACGTTCAG TGTACATATC
CGCCCTAAAA TTAATGCCGC CTTTAATGCC CCGGCTAAGG GCTGTATCAA TAATGAAATC
AATTTTCAGG ATGCTTCCAG CTCCGATGCG GGGCCAATGG TTTCTTGGTT ATGGGATTTT
GGTGACGGCT CCGTTTCAAC AGATCAGCAT CCCAAACATA CTTATGCAAG CGCGGGTATA
TTTGTGGTAA GCCTTATTAC TAAAACCGAA AACGGCTGCC AGAGTCTTCC TCATAAAGAA
AAAATCACCA TCAACAGTCT GCCTATAGTG GACTTTACCC TGCCTAAAGT ATGTGTAGGG
GATGAAATGG CCGTGTTCCT TAACAGAACT GAAAATGAAG ACAAAAGCAC GAATGGTTTT
ACCTATGCCT GGAATTTTGG TGATGCCTTT GGAGCAGTAC CCGACAACGG TTCAACGCAA
ATGGATGGAA ATCATAAATA CACCCGTGCA GGCAATTATG TGGTAACCCT AACGGCAACA
AATGTCAACG GATGTTCCTA TACCCGATCT AAACCTTTTA CGGTGAACGG CTCGCAAATT
ACGCCTGTAT TTGAAGTACT CAACAAAGAT CAGCTTTGCA GTAACAATAA AATTATGGTT
AAAAACTCTT CAACCATTGA TGAAGGTAAA ATTATCAAAC TGGTATGGTA TATTGATGGT
ATAGAGAAGC TGGTGGTCGA TGATCCGGAC CCTGTAGCAA TTTATGCTCT GGATCCGCCT
GCTGCTATTG ATGCCAATCC TAAAAACATC GTGGTTAGTT TGATCGCTTA TTCGGGTATT
AAATGCCAGG AACCTATTAA CCAAAACGTG ATCCTGAATG CTGCTCCGGC CCTCGTTTTT
GATCCGATAA CTCCTGTATG TTTGAATTCC GATGTGTTTC AGCTCACAAA TGCCAGGGAA
ACCCTTGGGT TGCAGGGGCA ACAGCGTTAT TCGGGCCCAG GTATCATCAG TGCTGATGGT
TATTTCGATC CCAAACTGGC AGGAATAGGT ACACATACTA TAGTTTATCA CTTTTTATCT
GCTGCCGGAT GCGAAGAAAA CGTGACACAA AGCATTACGG TTCATCCCTT ACCACAGTTA
AACCTGCCTG CCGACCTTTA CATCCTTGCG GGTGGACAGC TAAAAATAGA TGCTGTGGCC
AGCGGTTACC AATTGATTTA TAAATGGAGC CCGGCTACGG GACTCGATAG GGATAATATT
TTAAATCCCA TTGTAAAAGT AGAGGAAGAT AAAACCTATA CTTTAACGGT TGGCTCTGGT
TACGGCTGCA GCGTCAGCGC TACTGTAAAG GTGCACCTGG TCAATGCCAT AGAGCCGGCA
AACGCTTTTA GTCCAAACGG TGATGGAATA AATGATGTAT GGAATTTGAA ATACATAGAA
ACTTATCCTG ATGTTATTGT TGATATTTTT AACAGGTATG GTGAAAAAGT TTTTTTTAGT
CAGGGATATT CAATACCTTT TGATGGCAAT TATAAAGGGA GACAATTGCC TGTTGGAACA
TACTACTATA TGATCAATCC AAAAAATGGG AGAAAGATAA TTACAGGTTC ATTAACACTC
ATCAGATAA
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| Protein sequence | MYKWVFMLWA LSCFPFINAE AQNISNEGKD FWAVFPTHDP SRGQGGNSNL ANVRIYITAK
VASEVTVTCG TFSTGTIPIP INTAVPVDIP RVSAYVAQNE ANGVLVNKGI HVVVTPGHEK
VAVFEHIYAG ARSAASLILP NEALGREYYS MNYTQDLNNN EVSKNFLVLV AADPNTTLIV
HKKDGTTFKV NFVNAGDVYE YLPNTQEDLT GVYVEIDPAS PDNCNKRFAA YSGSTSLTIG
CNGSRDPLFQ QLYPIGSWGK NYGVVPFIDR RYIVRILAQQ DNTHFQFEGQ SITLNKGQFY
TSPELVNASF ISADKNISVA QYSLTQACSS VNGDELIGDP EMVLLNPVEF NVKSTTLFSS
DKENIVNRYI NVCIKASAAS TFRINGQPVN TVWTAIPSNP AYAYTQIEIT DISSYLTANE
GFNAVAYGFG AHESYAYSAG TNLAANTYFL VTNKITHKDA QNACIGQESD FKIILPYLVS
RITWKLDDGA EEQGPLDPRI IPASDGTLSY EYIYARGIAF TELKPHQVTI KIELLNDGTG
CLSEGAEFIY PFDVYPLPTP DFEVAADNCA DTEIQFTDHS TSNLTGRPLN KWLWDFGDGA
TSAEQNPQHI YALSGSFDVK LSAGLDEGCM SDVKTFSVHI RPKINAAFNA PAKGCINNEI
NFQDASSSDA GPMVSWLWDF GDGSVSTDQH PKHTYASAGI FVVSLITKTE NGCQSLPHKE
KITINSLPIV DFTLPKVCVG DEMAVFLNRT ENEDKSTNGF TYAWNFGDAF GAVPDNGSTQ
MDGNHKYTRA GNYVVTLTAT NVNGCSYTRS KPFTVNGSQI TPVFEVLNKD QLCSNNKIMV
KNSSTIDEGK IIKLVWYIDG IEKLVVDDPD PVAIYALDPP AAIDANPKNI VVSLIAYSGI
KCQEPINQNV ILNAAPALVF DPITPVCLNS DVFQLTNARE TLGLQGQQRY SGPGIISADG
YFDPKLAGIG THTIVYHFLS AAGCEENVTQ SITVHPLPQL NLPADLYILA GGQLKIDAVA
SGYQLIYKWS PATGLDRDNI LNPIVKVEED KTYTLTVGSG YGCSVSATVK VHLVNAIEPA
NAFSPNGDGI NDVWNLKYIE TYPDVIVDIF NRYGEKVFFS QGYSIPFDGN YKGRQLPVGT
YYYMINPKNG RKIITGSLTL IR
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