| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1523 |
|---|
| Symbol | |
|---|
| ID | 8252625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1806503 |
|---|
| End bp | 1807804 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644935177 |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003091798 |
|---|
| Protein GI | 255531426 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.925921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.624482 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAT TGCGGGACTA TCTTATCGGC AAAAAAACTT CTTTTACTTT AGAAGGCCGG
ATATTTCATT CTGTTTGTCT GGTTGCATTG ATGGGACTGG CGGTATGTAT ACCTTTTAAT
GCGTCGATAC AACTGTTCCG CCTTGCGTTA CTTATGGTTG TCATATTTTT GGCCGTACTA
ACCATTTATT ATTTTTCCCG CTTCAGGAAT AAAACAAGTG CAGGTATTGT TGTACTTTCG
ATAATCAATA ACCTGCTGCT TATGGTAAAT TATTATTATA ACTCAGGTGT TAACGGGCCA
AGTACAGTGG TCTTTGCCTT ATCATTTCTG ATTACTGTTT CCATTGTACC AAAAAAACAT
TTCTGGATAT GGCTACCATT AAATATAGTA ATTGTGCTTT CTCTGTTGTT TTTTGAGTTC
AGAAATCCGG AACTGGTTAG AAATACCTAC CCGGATGAAG CAGCTAAATT TACCGATATA
GGCTTTACTT ATTTATTGTG CGTAGCCACA ATTTTGCTGA TCACATCTTT CATCCGCAAT
TCGTATTATG GCGAAAGGGA AATAACAGCG CAAAAGACCA TAGCGCTTGA GGCCAGTAAT
CATACCAAGA ATAAATTGTT ATCCATCCTG GCACATGATC TTAAAGAGCC CCTGGCTTCT
ATACAAGGCT ATCTTGAGCT GCTTACAGAA TATAAGCTGG AAGAAGCCGA ACGTTTAAAT
ATGGAAAAGC AATTGTTAAG CAGAACCAAA GATACAGCTT ACATATTAGC TAATGTGCTT
TCCTGGACAA AAGGGCAAAT GGAAGCTGTT CAGATCAGTT TAAAGCCTTT AGTCTTAAAA
CAAAGCCTGT ACAGTACGCT GAAGGTAATG GAAGGTATTG CAAAAGAGAA GGGAATAGAA
CTCAGAAACC AGATTACAGA CGAGGTCTGT GTACTTGGAG ACCGCGACAT GCTGCAGCTG
GTGATCAGGA ACCTGATCAG CAATGCGATT AAATTTACCT TTCCGGGAGG AGATATTATT
GTTTCTGCAC ATATGCATCA AAATGAATGT GTCATAAGTG TGAAAGATAA TGGGGCAGGC
ATCCCTGCAG AACAACAATC CGCCATTTTT TCTCCGGCAC TCAAACCAAC ATTCGGAACC
GGAAATGAGA GAGGGGTAGG ACTTGGTTTG ATGCTATGTA AAGAATTTAC GGAATTGCAG
GGAGGTAAAA TAAGCTTCGA AAGCCAGACA GACGCGGGAA GTACATTTAT GGTTCACCTG
CCGCTGAGCC TGGAAGTTAA AGTAACCCGT CAGCCTGCTT AA
|
|---|
| Protein sequence | MIQLRDYLIG KKTSFTLEGR IFHSVCLVAL MGLAVCIPFN ASIQLFRLAL LMVVIFLAVL
TIYYFSRFRN KTSAGIVVLS IINNLLLMVN YYYNSGVNGP STVVFALSFL ITVSIVPKKH
FWIWLPLNIV IVLSLLFFEF RNPELVRNTY PDEAAKFTDI GFTYLLCVAT ILLITSFIRN
SYYGEREITA QKTIALEASN HTKNKLLSIL AHDLKEPLAS IQGYLELLTE YKLEEAERLN
MEKQLLSRTK DTAYILANVL SWTKGQMEAV QISLKPLVLK QSLYSTLKVM EGIAKEKGIE
LRNQITDEVC VLGDRDMLQL VIRNLISNAI KFTFPGGDII VSAHMHQNEC VISVKDNGAG
IPAEQQSAIF SPALKPTFGT GNERGVGLGL MLCKEFTELQ GGKISFESQT DAGSTFMVHL
PLSLEVKVTR QPA
|
|---|
| |