| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1517 |
|---|
| Symbol | |
|---|
| ID | 8252618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1799839 |
|---|
| End bp | 1802112 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644935171 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_003091793 |
|---|
| Protein GI | 255531421 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA ATCCAAACGA CATCAGTAAA TGCCCTTTTC ATAATGGAAG TATGAAGCAC
AATGTAGGTG GGGGTGGCAC CCGAAACAAG GACTGGTGGC CTAATCAGTT AAAACTGAAC
ATACTGCGTC AACATTCCTC CTTATCCAAT CCAATGGATA AGGATTTTAA TTATGCTGAA
GCCTTTAAAA GCCTCGACTT TGCAGCACTG AAGAAAGACC TTCATGCACT CATGACCGAC
TCGCAGGACT GGTGGCCGGC AGACTTTGGT CACTATGGTG GATTGTTTAT ACGTATGGCG
TGGCACAGTG CAGGAACTTA TCGTGTGGGC GACGGACGTG GTGGTGCCGG TGCAGGCTTA
CAGCGTTTTG CACCACTGAA TAGCTGGCCT GATAACGTAA GTTTGGATAA GGCCCGCAGA
TTGCTTTGGC CAGTTAAGCA AAAATACGGC CGCAATATTT CATGGGCCGA CCTGATGATC
CTTACCGGTA ACGTAGCATT GGAATCAATG GGTTTTAAAA CCTTTGGCTT TGCCGGTGGA
CGTGAAGATG TGTGGGAGGC GGATGAATCC GTTTATTGGG GTGCCGAAAC TACCTGGCTG
GGTGGCGATC TGCGTTATGC ACACGGTTCA CCCGGTGTGG AAGGCGATGG TGTATTGGTT
ACAGATGACA ATGCCGATGG CAATATACAC TCCAGAAATC TGGAGAAACC ACTTGCAGCT
GTGCAAATGG GCTTAATATA TGTAAATCCG GAAGGACCGG ATGGCAACCC TGACCCTATC
GCCGCTGCCA AAGACATTCG TGATACATTT GGCCGGATGG CTATGGACGA TGAGGAAACT
GTTGCATTAA TAGCCGGAGG TCATAGTTTT GGCAAAACCC ATGGTGCTGC CTCTGCAGAC
CATGTAGGCA AAGAGCCAGA AGCTGTAGAC ATTGAAATGC AGGGTTTGGG CTGGCGCAAC
AGTTATGGCA CTGGCAAAGG AGCCGATGCG ATTACCAGCG GACTGGAAGT AATATGGACA
AAAACACCGA CTCAATGGAG CAATAATTTT TTTGAAAACC TGTTTGGATT TGAATGGGAG
CTTTCTAAAA GCCCTGCTGG TGCGCAGCAA TGGGTAGCCA AAAACGCCGA AGCATTTATC
CCTGATGCCT TTGACGGTTC AAAAAAACAT CGTCCTACGA TGCTGACTAC CGACCTTTCT
TTAAGATTTG ATCCGGCATA CGAAAAAATA TCACGACGCT TTTTTGAAAA CCCCGATGCA
TTTGCCGATG CCTTTGCGCG TGCATGGTTT AAATTGACGC ATCGTGATAT GGGCCCGCGT
GAGCGCTACC TTGGTCCGGA AGTACCACAG GAAGAATTGA TTTGGCAGGA TCCTATCCCG
GCAGTAAACC ATGTACTGAT CAATGAAAAT GATATTGCGG CCCTGAAAGC ACAGGTATTG
GAATCAGGTT TAAGTATAGC TGAACTGGTT TCTACCGCAT GGGCCTCCGC TTCTACCTTC
CGTGGAACCG ATAAACGTGG TGGGGCCAAC GGTGCACGCA TCCGCCTTGC TCCGCAAAAA
TACTGGCAGG TTAACAATCC TCCACAATTA CAAAAAGTAT TGAATATACT GGAAGGCATT
CAAAAAGAAT TTAATACTGC ACAAACAGCT GGTAAAAAGG TTTCGCTGGC AGATTTAATT
GTACTGGCCG GTTGTGCCGG TGTTGAGAAG GCTGCAACCA CAGCAGGATA TGCCATAACT
GTCCCTTTTA TACCTGGTCG CATGGATGCC TCACAGGAAC AAACTGATGT AGAATCATTC
GGATACCTGG AACCTGCTGC CGACGGATTC CGTAACTATC GCAAATCGAA AATCCCGGTA
TCTACAGAAG AACTACTGAT CGATAAGGCC CACTTGCTCA CACTTACAAT ACCTGAGTTA
ACAGTATTGT TAGGCGGTAT GCGTGTATTG GATACCAATT TTGATGCCTC CAAGCATGGT
ATTTTCACAT CAAAACCGGG GCAGCTCAGC AATGATTTTT TTGTAAACCT GCTGGACATG
AACACCGTAT GGAAAGCAGC CTCTGCAGAT AGGGAAGTTT ATGAAGGCCG TGACCGCAAC
ACCGGTGAAA TAAAATGGAC CGGCACCCGT GCAGACCTTG TGTTTGGCTC CAATTCTGAA
TTGAGGGCGG TTGCTGAAGT GTACGGAAGC TCCGATTCCC GGCAGAAGTT TATAACCGAT
TTTGTATTCG CATGGAACAA AGTTATGAAT CTGGACCGGT TTGACCTGGG CTGA
|
|---|
| Protein sequence | MENNPNDISK CPFHNGSMKH NVGGGGTRNK DWWPNQLKLN ILRQHSSLSN PMDKDFNYAE
AFKSLDFAAL KKDLHALMTD SQDWWPADFG HYGGLFIRMA WHSAGTYRVG DGRGGAGAGL
QRFAPLNSWP DNVSLDKARR LLWPVKQKYG RNISWADLMI LTGNVALESM GFKTFGFAGG
REDVWEADES VYWGAETTWL GGDLRYAHGS PGVEGDGVLV TDDNADGNIH SRNLEKPLAA
VQMGLIYVNP EGPDGNPDPI AAAKDIRDTF GRMAMDDEET VALIAGGHSF GKTHGAASAD
HVGKEPEAVD IEMQGLGWRN SYGTGKGADA ITSGLEVIWT KTPTQWSNNF FENLFGFEWE
LSKSPAGAQQ WVAKNAEAFI PDAFDGSKKH RPTMLTTDLS LRFDPAYEKI SRRFFENPDA
FADAFARAWF KLTHRDMGPR ERYLGPEVPQ EELIWQDPIP AVNHVLINEN DIAALKAQVL
ESGLSIAELV STAWASASTF RGTDKRGGAN GARIRLAPQK YWQVNNPPQL QKVLNILEGI
QKEFNTAQTA GKKVSLADLI VLAGCAGVEK AATTAGYAIT VPFIPGRMDA SQEQTDVESF
GYLEPAADGF RNYRKSKIPV STEELLIDKA HLLTLTIPEL TVLLGGMRVL DTNFDASKHG
IFTSKPGQLS NDFFVNLLDM NTVWKAASAD REVYEGRDRN TGEIKWTGTR ADLVFGSNSE
LRAVAEVYGS SDSRQKFITD FVFAWNKVMN LDRFDLG
|
|---|
| |