| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1502 |
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| Symbol | |
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| ID | 8252603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1783401 |
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| End bp | 1783982 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644935156 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003091778 |
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| Protein GI | 255531406 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00125074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.109448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTAT ATAGAAATCT TTCAGATCAT GAACTGGTTG AACTGTTAAA ATCAGCTGAT
GACGCTGCTT ATGAAGAAAT ATACAAACGA TACTGGGCGC TATTGTTTCG CCATGCCTGC
AAAATACTCC ATAATGAAGA TGAAGCTAAA GATGTTGTAC AGGATCTGTT TACGGCACTT
TGGACCAAAA GACGGGAAAT AAACCTCAAC AGCTCACTTT CCTCCTATCT CTATTCGGCA
ATAAGATATA AAATATTCGA TCTCATCGAT AAACATAAAG TACGCAGTCG ATACCTGGCT
TCACTGGAAA GTTTTATCCA GGAAGGGCAA TATTCGTCTG AAGATGCTAT CCGGGAAAAA
CAACTCGCGG TCTTGATTGA AAAGGAAATT GCAGGCCTAC CCGAAAAAAT GAGAGAAGTC
TTTGAACTGA GCCGCAAAAG CAATCTCTCT CATAAAGAAA TCGCTAAAAA AATGGGCATC
TCCGATCAGA CTGTTAAAAA ACAGATCTAT AACGCCATCA AAATTCTTCG CCCAAAGTTC
GGCTTGTTCC TCATCATCCT TCGTTTTTTT AGCGCCAATT AA
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| Protein sequence | MNLYRNLSDH ELVELLKSAD DAAYEEIYKR YWALLFRHAC KILHNEDEAK DVVQDLFTAL
WTKRREINLN SSLSSYLYSA IRYKIFDLID KHKVRSRYLA SLESFIQEGQ YSSEDAIREK
QLAVLIEKEI AGLPEKMREV FELSRKSNLS HKEIAKKMGI SDQTVKKQIY NAIKILRPKF
GLFLIILRFF SAN
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