Gene Phep_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1497 
Symbol 
ID8252598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1774539 
End bp1776050 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content45% 
IMG OID644935151 
Productmetallophosphoesterase 
Protein accessionYP_003091773 
Protein GI255531401 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.675087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.1375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA AAAATCCGAT CAGACAGTTG TTATTCACAT TATTTTGCCT GCTTGGCCTC 
AGTGCCGGCG CACAATCTTT TTTACCGGCC GGAAGTATTG TTTATCCTTT CCGTGCCTCG
CCCCTCATTG CACAAACCGG CAACCAGTTT CACATCCTGT ACAACAATAG TGGCGAACGA
AATATTGATT CCATTGTACT CAAAGGTCCT TACAGCCGGG TCAAAGTTAA AATTGACTCC
GTATTAAAAG GCCGCTTTGA ATACGACTCG TATACCCATA TGTATACCAA TAATAAGATC
TGGGTCAGTA TCCCGGCCAA CAGCCCGGAA GACATGTATG ATCTTTTGGT TTACTCGGCA
GGAGAAATCA ATATTTCCAG ACGTTCTGTT AAACTGGTTA AAACCTTCCC CTCAAAGCAC
AGCTTTATCC ATATATCCGA TACACACGTC TCGCGGAACT GGGTCGGATC TGCCCAAAAT
GGTTATGCCG AGGAACTTCA GCTGCTGGAC AAATTTATCA CTGTTGCCAA CATCATCGCA
CCCGATTTTG TGATTGTTAC CGGTGATCTT ATCCACGATT ACACCCGGTT CAACAAAGAT
CTCAGAGGCT GGGGTGGCGA TACCGTGAAG AGCTATGTTA AACTGCCTAC CGTTGAAGAA
AAGTTCAGAA ACTATTTTGA AGGTGCCAAA GGATACAGAG GGGTGCAGCA CATCAATGCA
CCGGTATTCT CTGTTCCCGG CAACCATGAT TTTTATGGCA TGAAAGAAAC CGATTATCCG
GCAAAAGCCG CACAATGGAA TACCCTATGT GGCATGCGCG TATTTGGAAT GGCCTTTGCC
GGCACACGCT TTCTTTTTAT GGACGATTAC CTGGGTGACC CAGTTGTGGA CATACCAGAC
AAAAAGCCCC TGTCGGGCCT CCAGGGTAAG CAGCTTTTGA AATTTCTGGA AACTCATGGA
AAAGGTGAAC TCCGGATCAT CGCACAACAC AAGCAAAACC GTGCTGATAC AGCTTTTCTA
AACCAGCAAA AAGTAAAACT TATCGTTAAC GGCCATATCC ATACGCCACA CGTAGACACA
TTAGGTAAAA CCCCAACTAT CAGAATGCGT CCTGGTGTAG TTTGCCGCAG CGGGGAGGCA
CATCGCTGGG AACTCATACT AGGTCTTTTC CGGATTATCC GAATCGATGG TGATTCCTTT
ACTTTTACTG AACCCTTGCG GTTCTGTTCC AACCCTATCG AAGCTTACGA TAAGATCAAG
CTGAACCTAA CCCTCAATTA TAAGGGTGAC AATACTGGTA AAAGCACGTA CAACGAAGCT
TTAATAGCCA ATAAACTGCC AGAGAACCTC CCAGGCTGCC GGGTTCGTTT TGTGATGAAG
AAAGGAAACT ATACAGTTAC AGGGGGCAGA ATACGTCAAA CTTTTAACAG TGGTAAATTG
TCAATAGTTG ATGTGGATAC AGATGTAAAT GCAACAACCA GCAAAAAAGT GAGCATTAAA
CCAAAAAAAT AG
 
Protein sequence
MSTKNPIRQL LFTLFCLLGL SAGAQSFLPA GSIVYPFRAS PLIAQTGNQF HILYNNSGER 
NIDSIVLKGP YSRVKVKIDS VLKGRFEYDS YTHMYTNNKI WVSIPANSPE DMYDLLVYSA
GEINISRRSV KLVKTFPSKH SFIHISDTHV SRNWVGSAQN GYAEELQLLD KFITVANIIA
PDFVIVTGDL IHDYTRFNKD LRGWGGDTVK SYVKLPTVEE KFRNYFEGAK GYRGVQHINA
PVFSVPGNHD FYGMKETDYP AKAAQWNTLC GMRVFGMAFA GTRFLFMDDY LGDPVVDIPD
KKPLSGLQGK QLLKFLETHG KGELRIIAQH KQNRADTAFL NQQKVKLIVN GHIHTPHVDT
LGKTPTIRMR PGVVCRSGEA HRWELILGLF RIIRIDGDSF TFTEPLRFCS NPIEAYDKIK
LNLTLNYKGD NTGKSTYNEA LIANKLPENL PGCRVRFVMK KGNYTVTGGR IRQTFNSGKL
SIVDVDTDVN ATTSKKVSIK PKK