| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1489 |
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| Symbol | |
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| ID | 8252590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1768750 |
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| End bp | 1769721 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644935143 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091765 |
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| Protein GI | 255531393 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.616641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACATA TATCTATTTT GCCTCTTTAT GATGCGACTC TGACCAGCAT CGATAGCGCT
CACCAGATCT TCAGCCGGGT TAACGATTTT ATGAATTATC AGGGTAAACC AGATTTTTAT
AAAATCGAGA TTGTTGGCTG TGCAAAGGAT ACGAGACTCA ATAGCGGGTT GTATGCTGTA
TTTGCAGATA AAACAATTGA TCAGATTCAA AAGACCGATG TTATTGTTAT CCCATTACTG
TGCGGAGATT TTGGGGAAGC TATATCGAAA AACCAGGAAT ACGTTGAATG GGTTTGTAAG
CAACACCGTA ACAGAGCGGA GATAATTTGT CTTTGCGTTG GTTCGTTTTT TTTGGCATCC
ACGGGCTTGT TGGACAATAA AAAGTGTGCA GTACATTGGG CCGCTAAAAA CGAATTTAAA
ACAAAGTTTC CCAATATTAC AGTTATTGAT AATACCATTA TTACCGATGA ACAGGGTATT
TATACTTGTG GAGGAGGCTT TTCTTACCTA AACCTAATCC TTTATATTAT TGAAAAACAT
TTGGGTCGTG AGATATCCAT TTTGGCCTCT AAGATGTTCG AGATCGACAT TGAGCGAAAA
AGCCAAAACC CATTTGCCAT CTTCATCGGA CAAAAGAAAC ACGGTCAGGA AACGGTATTG
AAAGCACAGG CTTTTATTGA AGCTAATCCG ACAACTGCTT ATAGTGTAGA TGAGATCTGC
GAAATGGTCG CTGTCAGTCG ACGAACATTT GAACGGCATT TTAAGCAATG CACCGGCAAT
TCTATCCTGG AATATATCCA GCGTGTAAAA GTCGAGTTTG TGAAAAAGCA ATTAGAAGCC
GGCAAGAAGA CCATAAATGA AATTATCTAT GAGGCAGGTT ATACAGACAT CGACGCATTC
AGAAAAGTGT TTAAGAGGTT TACTGATTTA TCACCCATTG GCTATCGTAA GAGGTTTGCC
GGGGATTCTT AA
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| Protein sequence | MKHISILPLY DATLTSIDSA HQIFSRVNDF MNYQGKPDFY KIEIVGCAKD TRLNSGLYAV
FADKTIDQIQ KTDVIVIPLL CGDFGEAISK NQEYVEWVCK QHRNRAEIIC LCVGSFFLAS
TGLLDNKKCA VHWAAKNEFK TKFPNITVID NTIITDEQGI YTCGGGFSYL NLILYIIEKH
LGREISILAS KMFEIDIERK SQNPFAIFIG QKKHGQETVL KAQAFIEANP TTAYSVDEIC
EMVAVSRRTF ERHFKQCTGN SILEYIQRVK VEFVKKQLEA GKKTINEIIY EAGYTDIDAF
RKVFKRFTDL SPIGYRKRFA GDS
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