Gene Phep_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1481 
Symbol 
ID8252582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1758590 
End bp1759588 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content44% 
IMG OID644935135 
Productvon Willebrand factor type A 
Protein accessionYP_003091757 
Protein GI255531385 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.587986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.160763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGTG GAATAGAATT CGCCAACCCA GGCTTTTTCT GGCTCATGCT CATCATCCCC 
CTGATGCTGG CCTGGTACAT CTGGAGGAAC AGCAAACTGC AGGGCAGTCT GAGCATGTCG
GCCGTAAAGG GGTTTTCGCT GGCAAAAAGA AATGGTTATG CCATTTTAAG GCATTATGGT
ATCGCATTAA GGATATTAGC ACTGATGGCA CTGATCATTG CGCTGGCCAG GCCACAATCG
GCCTTTAGCT GGCAAAATTC AACTACCGAA GGCATTGATA TTGTAATTGC AACAGATATT
TCGGGCAGTA TGCTTGCTGA AGACCTTAAA CCTAACCGGC TGGAAGCGGG AAAGAACATC
GCCATTGATT TTATCAAAGG CCGTCCGGAA GACAGGATAG GGCTGGTTAT TTTTAGTGGT
GAAAGTTTTA CACAATGTCC CTTAACCATA GACCACGATG TGCTGATCAA TTTATTCAGC
GACATCAGCA ATGGAATGGT AGAAGATGGA ACGGCAATCG GGATGGGACT GGCAACTGCG
GTTAACCGCT TAAAAGATAG TGAAGCCAAA AGCAAAGTGG TGATTTTGCT TACCGACGGA
TCAAATACTA CAGGTTCTAT ACCACCTTTA ACTGCTGCAG AAATAGCCAA ACAAATGAAG
GTTAGGGTGT ATACCATTGG GGTAGGTACA AAAGGCTATG CTCCATATCC GGTAAAAACA
CCTTTTGGTA CACAATACCA GCAGGTACCT GTAACCATTG ATGAAGGCGT GCTCTCGAAG
ATTGCGGGCA TAACAGGAGG AAAGTACTTC CGTGCTACCA ATAACGAGAA GCTGAAAGAG
ATTTACCAGC AGATAGATAA GCTGGAAAGG GCCAAGATTG CAGTGACCCA ATACCACAAA
AAAACAGAAC GCTTTTTACC TTTTGCCCTT ATTGCATTGG TTTTACTGCT ATTGGAGTTT
TTATTAAGAA ATACAGTTTT TAAAGGAGCC TTAACTTAA
 
Protein sequence
MFSGIEFANP GFFWLMLIIP LMLAWYIWRN SKLQGSLSMS AVKGFSLAKR NGYAILRHYG 
IALRILALMA LIIALARPQS AFSWQNSTTE GIDIVIATDI SGSMLAEDLK PNRLEAGKNI
AIDFIKGRPE DRIGLVIFSG ESFTQCPLTI DHDVLINLFS DISNGMVEDG TAIGMGLATA
VNRLKDSEAK SKVVILLTDG SNTTGSIPPL TAAEIAKQMK VRVYTIGVGT KGYAPYPVKT
PFGTQYQQVP VTIDEGVLSK IAGITGGKYF RATNNEKLKE IYQQIDKLER AKIAVTQYHK
KTERFLPFAL IALVLLLLEF LLRNTVFKGA LT