Gene Phep_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1478 
Symbol 
ID8252579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1755714 
End bp1756742 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content44% 
IMG OID644935132 
ProductATPase associated with various cellular activities AAA_3 
Protein accessionYP_003091754 
Protein GI255531382 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.596257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.470444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAG TAACTAATAT TACTGCGCAT TCATCGTATG GAACTGACCT CCGTGCACTG 
AATGAAATGA TACAAAAAGA AAGTGCATTT ATCGATCTCC TGTTTATGGA AATGGATAAA
GTGATTGTTG GACAAAGATA TATGGTAGAG CGGCTGATGA TCGGGTTGCT GGCCGACGGG
CATATTTTGC TGGAAGGGGT ACCCGGCCTT GCAAAGACCC TTGCCATAAA TACACTTTCT
AAGGCTATAG ATGCGGGCTT CAGCAGGGTA CAATTTACAC CAGATTTGCT TCCGGCAGAT
TTACTGGGAA CCATGATCTA TAACCAGAAG AAGGAAGAGT TCATTGTCAG AAAGGGGCCT
TTGTTTTCTA ATTTTATTCT TGCTGATGAG ATCAACAGGG CACCGGCTAA GGTACAGAGT
GCTTTACTGG AAGCTATGCA GGAGCGGCAG GTAACGATTG GCGACAATAC TTTTGAATTG
CCTAAACCTT TCCTGGTACT GGCCACCCAA AATCCGATTG AACAGGAAGG GACCTATCCG
CTGCCGGAAG CACAGGTAGA CAGGTTTATG CTCAAAGTGG TGATCGGTTA TCCCAATAAA
GAAGATGAAA AAAAGATTAT GAGGGCCAAT ATCGCCCCTC AGGGTATGCC TAAGCCAAAT
GTAGTGCTTC ATCCAGACGA AATTTTAAAA GCCCGTAAAG TGGTAAAAGA GGTTTATATG
GATGAAAAGA TTGAACAATA CATCATCGAT ATCGTTTTTG CAACCCGTTT CCCCGATCAG
TATAAACTGG CCGATTATAA AAACCTGATC AGTTTTGGTG CCTCGCCAAG GGCCAGCATT
AACCTGGCAC TGGCAGCTAA AGCTTATGCA TTTATTAAAA GAAGAGGATA TGTAATTCCG
GAAGACGTAA GGGCCGTTTG TCATGATGTG CTGCGGCACC GTATTGGCCT GACCTATGAA
GCGGAGGCAG AAGACATCAA TACAGAAACC ATTATTACCG GAATATTGAA TGCCATAGAA
GTGCCGTAG
 
Protein sequence
MEEVTNITAH SSYGTDLRAL NEMIQKESAF IDLLFMEMDK VIVGQRYMVE RLMIGLLADG 
HILLEGVPGL AKTLAINTLS KAIDAGFSRV QFTPDLLPAD LLGTMIYNQK KEEFIVRKGP
LFSNFILADE INRAPAKVQS ALLEAMQERQ VTIGDNTFEL PKPFLVLATQ NPIEQEGTYP
LPEAQVDRFM LKVVIGYPNK EDEKKIMRAN IAPQGMPKPN VVLHPDEILK ARKVVKEVYM
DEKIEQYIID IVFATRFPDQ YKLADYKNLI SFGASPRASI NLALAAKAYA FIKRRGYVIP
EDVRAVCHDV LRHRIGLTYE AEAEDINTET IITGILNAIE VP