| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1475 |
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| Symbol | |
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| ID | 8252576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1749552 |
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| End bp | 1750901 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935129 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003091751 |
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| Protein GI | 255531379 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.236212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.298581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTA AAATCTATCT CATAATTGTG CTGCTTGTAA TGTCTTATGT TAGGCTGAGG
GGGCAGGGTA CTGACTCTTT AAACTATCAG CTTAGCCTTA AAGCAGCAAT TGATTACGCA
TTGACACACC AAACTGCTGT GCTGAATGCG ACGGTTGATG AAGAAATAGC CCGGAATAAG
GTGAAAGAAA CCATTGGCAT TGGTTTACCG CAGGTTTCTG CAAGCTACAA TTTCCAGGAT
TTTTTAAAGC TGCCAACCAC ATTATTACCT GGAGAGTTTT CCAATCCACC TTCAGATACC
CCAATTCCGG TTAAGTTTGG TACAAAATAT AATTCAACAG CAGGCATAGA GCTGAGCCAG
CTTATTTTTG ATGGCAGTTA CTTTGTTGGT CTGCAGGCTT CCAAAACCTA TAAGGAACTG
TCGGTCCGTA ACAGCAGGCG CAGCAAAATT GAAACTGCAA CGGCAGTTAC CAAAGCCTAT
TACTCGGCAT TGGTAAGTAC TGAGCAGCTG GCGCTGGTAG ATGCCAATCT TGCACAACTT
ACGAAATCAC TAAACGACAC GGAGGCCTTG TTTAAAAATG GCTTTGCAGA GCGGATTGAT
GTAGACAGGC TCCAGGTTTT GAAAAACAAC CTGGAGACAG AGCGTGAGAA TGTGACCCGA
TTGCTGCAAC TGAATATTGA TATGCTGAAA TTCCAGATGG GAATGCCCAT TCAGGCCCGG
CTTTTGCTTA CCGATAAGAT CAGTGACATC AGGTCAGAAC CGGTTGCAGC TATGGCCACA
GATTCAACTG CTTACAAAGG AAGGATTGAG TATTCTTTAC TGGAAACGCA GAAAAAACTG
AATGAGCTGG ACTTCAAAAG ACAGAAAAGT ACGTTCCTGC CTACATTGAG AGGTTTTGCC
AGTGCATCAA AGAACTACCA GTCGGATGAA TTTTCGAAAC ATTATGAGCA GAGTTTTCCG
ACCTCAGTAA TCGGTTTTAC GCTTTCCTGG AATATAATTA ATGGGGGACA ACGTATTTAC
CAGATGCGGA CTGCAAAACT GACCATTCAA AAGACGGAAA ATGAAATGCT GAACCTAAAA
AATGGAATAG CAAACGAAAT TTCGGCCGGT CAGAAGATTT ACCTGAACAG CAAGCGCTCT
GTAGAAAACC AGGAGCGCAA TCTGACCCTT GCCAAAGAGA TCCTTCGGGT AACCCGGGTC
AAATATGAGC AGGGGGTAGG CTCCAGCCTG GAAGTGACAA CAGCGGAAAC TTCATTAAAA
GAAGCGCAAA ACAATTATAT AAAAGCTTTA TATGACTTGC TGATCAGTAA GGTAGACTTG
GATAAAGCGG CAGGAAAAAT CAATTATTAA
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| Protein sequence | MKPKIYLIIV LLVMSYVRLR GQGTDSLNYQ LSLKAAIDYA LTHQTAVLNA TVDEEIARNK
VKETIGIGLP QVSASYNFQD FLKLPTTLLP GEFSNPPSDT PIPVKFGTKY NSTAGIELSQ
LIFDGSYFVG LQASKTYKEL SVRNSRRSKI ETATAVTKAY YSALVSTEQL ALVDANLAQL
TKSLNDTEAL FKNGFAERID VDRLQVLKNN LETERENVTR LLQLNIDMLK FQMGMPIQAR
LLLTDKISDI RSEPVAAMAT DSTAYKGRIE YSLLETQKKL NELDFKRQKS TFLPTLRGFA
SASKNYQSDE FSKHYEQSFP TSVIGFTLSW NIINGGQRIY QMRTAKLTIQ KTENEMLNLK
NGIANEISAG QKIYLNSKRS VENQERNLTL AKEILRVTRV KYEQGVGSSL EVTTAETSLK
EAQNNYIKAL YDLLISKVDL DKAAGKINY
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