| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1471 |
|---|
| Symbol | |
|---|
| ID | 8252572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1744329 |
|---|
| End bp | 1745651 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644935125 |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003091747 |
|---|
| Protein GI | 255531375 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.104212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCAAT TATTTAGATA CAGAATCCCG AGTAAGTATA CCAAGGAATT TCAGGATACC
TATGGCTATA TAAACGTTAA GCAGGTTACC ATTTTAGCAA CCCTTGTACT GTTTATTGCC
TTTGGCGTAA GGTTAACCTC TATTTTTTAT CAGCATGAGT TCGTTTCCAT GCCCAATCTG
ATCCACTATA ACCAGTTGAA CTGGATACAG CTTTCAGGAT CGGTTACATT TATCCTTATC
AGCGGTTATG CCTTAAAGTC TGCACATTGG ACAACAACAG GCAGAAATTT GCTCGTACTT
GTGTTTTGCC TGTTCTTACT CACCACATCC TTTACAGTAA GCTATCTTTT TTCCCTGTTT
AATCCCAAAA ACACATTAAC CATATTCCTT ACCGGTGTTG TAGCCGTCAG TGTATTTTTC
GCGCTCGAAT TTAAACAGAT CATTATCATC TCTATTTATA TTGTGCTGCT GTTCATTGCA
GCAATGGTTA TCCCCGATAT CAGCAATCAG CAAAAGCTCC TCAATGTGAT CATGTCCGGG
GTGCTGGCAT TTTTTATGTA TGCCTGTTCC AGGTATAGCT ATTACTTTAA AGCCGAACAG
TTTGTAAAAG TCAAACAACT GGAAGAAAAA AATGCTGAGG TGCTTTTGCT GAACCATCAA
AAAAGTGAAA TCCTTGGTTT TGTGGCCCAC GACCTTAGAA ATCCCCTCAA TAACATAGAG
GCACTTACCA GGATTGTGCT GGAAGACAAT CCCGATTTCG GTAGTACAGA AATGCAACTC
ATCCTGAGTT CCACACGCCA GGCAAAAAGC ATCATCGACG ACCTGCTGGA AATTGCACAG
CACAATAAAA CGCCTTTCCA GTTGCAGACC ACCAATATGA TCGCCTTTAT GAACAATATA
TGCAACAACT GGCAGAGGAA CCTGAACAAT GAACGTAAGA TCATCTTTCA TGCCCCGCCG
CAAGAGCTTG TAGCGGCTGT AAACCCTTCT AAACTAACAC GGGTAATAGA TAACCTGATT
GGAAACAGCC TTAAATTTTC AAAGTCAGAA ACGCCCATCA ATATTGATGT CTCAAAATCT
GATCAGTCAT GCCTCATCAG CATCACCGAT TTTGGGATCG GAATCCCTCT GAGTTTACAG
CAAATGCTTT TTGATCCCTT TTCCAAGGCT GGCAGACCGG GGCTTAAGGG CGAAAAATCA
ATAGGTCTGG GCCTTCATAT TTCTAAACAG ATCATAGAAC AGCATGGCGG CTCTTTAACT
GTAAACAGCA GGGAAAATGA AGGAACAACC TTCCAGATCA CCCTGCCTTT TATAGCAGCT
TAA
|
|---|
| Protein sequence | MFQLFRYRIP SKYTKEFQDT YGYINVKQVT ILATLVLFIA FGVRLTSIFY QHEFVSMPNL
IHYNQLNWIQ LSGSVTFILI SGYALKSAHW TTTGRNLLVL VFCLFLLTTS FTVSYLFSLF
NPKNTLTIFL TGVVAVSVFF ALEFKQIIII SIYIVLLFIA AMVIPDISNQ QKLLNVIMSG
VLAFFMYACS RYSYYFKAEQ FVKVKQLEEK NAEVLLLNHQ KSEILGFVAH DLRNPLNNIE
ALTRIVLEDN PDFGSTEMQL ILSSTRQAKS IIDDLLEIAQ HNKTPFQLQT TNMIAFMNNI
CNNWQRNLNN ERKIIFHAPP QELVAAVNPS KLTRVIDNLI GNSLKFSKSE TPINIDVSKS
DQSCLISITD FGIGIPLSLQ QMLFDPFSKA GRPGLKGEKS IGLGLHISKQ IIEQHGGSLT
VNSRENEGTT FQITLPFIAA
|
|---|
| |