| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1464 |
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| Symbol | |
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| ID | 8252565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1738673 |
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| End bp | 1739533 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935118 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003091740 |
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| Protein GI | 255531368 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.904069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAA TCAGGATTGA AAGATCAATT ACCAACAGGA GCCAGGATTC TCTGGCCCGC
TACCTGCAGG AAATTTCAAA ATACCCCTTG CTGGATGCAG AGGAAGAAAT TGTCCTGGGA
AAGAGGATTA AAGAAGGAGA CTGGGATGCA CTGCAAAGGC TGGTTAGCAG TAACCTGCGT
TTTGTGGTTA CAGTAGCTAA AAAATATGAA AGTCCGGACC TGTCGCTGGC CGACCTGATT
TCGGATGGAA ACATTGGCCT GATCAAGGCT GCAGAACGTT TTGATGAAAA AAGAGGTTTC
AAATTTATTT CTTATGCTGT ATGGTGGATC CGACAATCTA TCCTGCAGGG AATGAACACC
AGTAAACGAA TGGTACACCT GCCCATGAGC CAGATCAGCG GGATACGGCA GGTAAAAAGA
TCAGAAATAA AACTGGAGCA GGAGCTTCAA CGGATACCCT GCAGGGAAGA ACTTGCCGGA
TTTATGAAGA CTGCTGAGGA GGTAGTTTAT GATTATCTGT ATATTTCAGG TAGCCAGGTC
TCATTGGATG CACCAACTGA AGGTCAGGAT GGCGTGCTGA TTCCTTGTAT TGTTCAGTAC
GACAAAGGTC CGGCACCGGA TGCCAGTCTA GAACGGGAAT CACTTGAGAA GGATGTGCAA
CGCATGATGG ACATCCTTAG TCCGCGCGAA CGGAGCATTC TTTTTCTTGC TTATGGTATG
GGTAACAACA GGCCATTGCA AAATGACGAC ATCAGTACTT TACTTGGATT AAGTACTGAA
ACAATCCGCC GTTCTAAAAA TAAGGCACTG GACAGGCTTC GGGGCTTAAA AGAAATAAAA
ATGATGCGCA GATATCTTTA A
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| Protein sequence | MKEIRIERSI TNRSQDSLAR YLQEISKYPL LDAEEEIVLG KRIKEGDWDA LQRLVSSNLR
FVVTVAKKYE SPDLSLADLI SDGNIGLIKA AERFDEKRGF KFISYAVWWI RQSILQGMNT
SKRMVHLPMS QISGIRQVKR SEIKLEQELQ RIPCREELAG FMKTAEEVVY DYLYISGSQV
SLDAPTEGQD GVLIPCIVQY DKGPAPDASL ERESLEKDVQ RMMDILSPRE RSILFLAYGM
GNNRPLQNDD ISTLLGLSTE TIRRSKNKAL DRLRGLKEIK MMRRYL
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