| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1454 |
|---|
| Symbol | |
|---|
| ID | 8252555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1725232 |
|---|
| End bp | 1726710 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644935108 |
|---|
| Product | glycosidase PH1107-related |
|---|
| Protein accession | YP_003091730 |
|---|
| Protein GI | 255531358 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2152] Predicted glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.719751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.786023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAT TAATAGAACG AAAACCAGTT AAAGTATACC CAGATCCTAA ACGGGTAATT
GCAAGATTTT TTTTTAACGG AGATGAAAGA GCTGTAGAAG TGGTGAGGCA TGTACTGGCC
CTTTCGGATA AAGATGTATT CGGACTGATC TCGCCTTTGT TACAGGAATA TTCCAAGAGG
CACCGGAACA TCACCAAAAT ACTTGCCCGT CACTGTAAAA AGATCAAACA CTGTATAGAA
ACGGCGGGTT ACGATTTTGA ATCGCTTGAT AAATATCAGA AGTTGCTGCT TGGATCCTAT
TTCACACATG AATATTCTAT AGAATCTGCA GCTTTTTTTA ACCCTTCGGT AGTAGAAGAC
CCTGATCAGT CCGACCTGGT TGAAGGTGAA AAAAGGCTGA TCATCAGTTT CAGGGCAGTA
GGTGAGGGGC ACATTTCGTC TGTCGTGTTC CGTCGTGCAC TGATAGACCG TAACCATAAC
ATTACGGTAA TCCCGGTAGG CAATTATATT GATGAAGCGG AGATCATTAA GAACGCGGTC
TATAATAAAA AACTATTTCT TAAAAAAGCG GCTGATTCCC GCATAGATAT AGAGGTTTTG
GATGAGGTAG GTGTTAAACT GGAGGATAAA TTTGATTATG CCACACTCAG AAAGATCATT
CTTGACAGCA AAGGTCTGCA GGAAGATGAC CTTAAAAAAC TGGAATATGA CAAGATCCTC
TGGTTGTCGG ATACCTACCA TGAGATCAGC TTTTCGAGGG ACACCGATAT TTCTGACCGG
GTGATTTTCC CCATCTCTGA ATTTGAGCGC AAGGGTATAG AAGATGCCAG GTTTGTCCGT
TTTGTAAAAG ATGATGGCAG CATTATTTTT TATGCCACCT ATACTGCTTT TGATGGGGCC
ATGATTATGC CCAAGCTATT GCAGACCACG GATTTTTACG ATTTTAAGAT CAGTCCGCTA
CATGGTATTG GTGCGCAGAA TAAAAATCTG GCACTTTTTC CACGTAAGAT CAACGGCAAA
TATGCCATGA TGTCGCGCAT AGATGGCTGG AACAACTACC TAATGTATTC CGATAAGCTT
ACGGTATGGG ATAACCCTGT AAAGCTGCAG GCACCACAGT TTCCATGGGA ATTCATACAG
ATCGGTAATT GTGGTTCGCC TATAGAAACT GAGGCCGGCT GGCTGGTGAT TACCCATGGT
GTAGGGCCAA TGCGCCGTTA TTGCCTGGGA GCCAGTTTGT TTGATCTGAA TGATCCTTCA
ATAGAAATAG GAAGGTTAAA TGAGCCACTG GTTATTCCCA ATACAGATGA AAGGGAAGGG
TATGTACCTA ATGTGTTGTA TTCCTGTGGT TCGATCATTC ACGATGGTGA ACTGATCATT
CCCTACGGCC TGTCGGATTA TTGTTCTTCC TTTGCCACGG TAAAAATAGC ACTGTTACTG
GAAAAACTGG AAAGCACTGA CTTATATCGT CCTGCATAG
|
|---|
| Protein sequence | MRLLIERKPV KVYPDPKRVI ARFFFNGDER AVEVVRHVLA LSDKDVFGLI SPLLQEYSKR
HRNITKILAR HCKKIKHCIE TAGYDFESLD KYQKLLLGSY FTHEYSIESA AFFNPSVVED
PDQSDLVEGE KRLIISFRAV GEGHISSVVF RRALIDRNHN ITVIPVGNYI DEAEIIKNAV
YNKKLFLKKA ADSRIDIEVL DEVGVKLEDK FDYATLRKII LDSKGLQEDD LKKLEYDKIL
WLSDTYHEIS FSRDTDISDR VIFPISEFER KGIEDARFVR FVKDDGSIIF YATYTAFDGA
MIMPKLLQTT DFYDFKISPL HGIGAQNKNL ALFPRKINGK YAMMSRIDGW NNYLMYSDKL
TVWDNPVKLQ APQFPWEFIQ IGNCGSPIET EAGWLVITHG VGPMRRYCLG ASLFDLNDPS
IEIGRLNEPL VIPNTDEREG YVPNVLYSCG SIIHDGELII PYGLSDYCSS FATVKIALLL
EKLESTDLYR PA
|
|---|
| |