Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1450 |
Symbol | |
ID | 8252551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1722149 |
End bp | 1722727 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644935104 |
Product | nitroreductase |
Protein accession | YP_003091726 |
Protein GI | 255531354 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.761824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACG AAATCGCAAT TTTAAGTCAT ATCATCAAAC GCCGGAGAAG TATTTTTCCG GTTAGCTATA CCCGGCAGGA GATTCCGGTA ACTGTGATCA GACAGATCCT GGAAAGTGCA AATTATGCAC CCACACATAA ACTGACTGAA CCCTGGAGGT TTATGGTATT CAGGAATGAA GGAAAAACGA AACTGGGCAT CGAACTTGCA CGTTTATATA AAGAAAGCAC CCCTGCCCCT CAGTTTCTGC AGAAAAAATA TGACAGCATC ACAGAAAAAA TAGCCCAGTC CAGCTGTGTG ATCGCTTTAA ATGCGCAACT GCATCCGGAT AAGGTACCGG AATGGGAGGA ACTTGCAGCC CTTGCCTGTG CTGTACAGAA TATGGCCCTT ACCGCCGAAG CCTTAAATGT AGGCGCGTAC TGGAGTTCAC CAGGCATGAT TGCAAATCTT AAAGAATATC TTAACTTAGG TGGACAGGAA AAATGTTTCG GACTTTTTTA TATGGGGTAT CACAATGAAG AACCCAGGGA AGCAAAACGT ACACCAATGG CAGAAAAAAT TAAATGGATA GAGTCGTAA
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Protein sequence | MENEIAILSH IIKRRRSIFP VSYTRQEIPV TVIRQILESA NYAPTHKLTE PWRFMVFRNE GKTKLGIELA RLYKESTPAP QFLQKKYDSI TEKIAQSSCV IALNAQLHPD KVPEWEELAA LACAVQNMAL TAEALNVGAY WSSPGMIANL KEYLNLGGQE KCFGLFYMGY HNEEPREAKR TPMAEKIKWI ES
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