Gene Phep_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1450 
Symbol 
ID8252551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1722149 
End bp1722727 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID644935104 
Productnitroreductase 
Protein accessionYP_003091726 
Protein GI255531354 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.761824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG AAATCGCAAT TTTAAGTCAT ATCATCAAAC GCCGGAGAAG TATTTTTCCG 
GTTAGCTATA CCCGGCAGGA GATTCCGGTA ACTGTGATCA GACAGATCCT GGAAAGTGCA
AATTATGCAC CCACACATAA ACTGACTGAA CCCTGGAGGT TTATGGTATT CAGGAATGAA
GGAAAAACGA AACTGGGCAT CGAACTTGCA CGTTTATATA AAGAAAGCAC CCCTGCCCCT
CAGTTTCTGC AGAAAAAATA TGACAGCATC ACAGAAAAAA TAGCCCAGTC CAGCTGTGTG
ATCGCTTTAA ATGCGCAACT GCATCCGGAT AAGGTACCGG AATGGGAGGA ACTTGCAGCC
CTTGCCTGTG CTGTACAGAA TATGGCCCTT ACCGCCGAAG CCTTAAATGT AGGCGCGTAC
TGGAGTTCAC CAGGCATGAT TGCAAATCTT AAAGAATATC TTAACTTAGG TGGACAGGAA
AAATGTTTCG GACTTTTTTA TATGGGGTAT CACAATGAAG AACCCAGGGA AGCAAAACGT
ACACCAATGG CAGAAAAAAT TAAATGGATA GAGTCGTAA
 
Protein sequence
MENEIAILSH IIKRRRSIFP VSYTRQEIPV TVIRQILESA NYAPTHKLTE PWRFMVFRNE 
GKTKLGIELA RLYKESTPAP QFLQKKYDSI TEKIAQSSCV IALNAQLHPD KVPEWEELAA
LACAVQNMAL TAEALNVGAY WSSPGMIANL KEYLNLGGQE KCFGLFYMGY HNEEPREAKR
TPMAEKIKWI ES